Evidence map›Paper›PMID 30195660›Full record

ArticleJournal of biomedical informatics2018

An evaluation of clinical order patterns machine-learned from clinician cohorts stratified by patient mortality outcomes.

Jason K Wang, Jason Hom, Santhosh Balasubramanian, Alejandro Schuler, Nigam H Shah, Mary K Goldstein, Michael T M Baiocchi, Jonathan H Chen

Abstract read
In one paragraph

Article in Journal of biomedical informatics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Trial
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Physician Usage and Acceptance of a Machine Learning Recommender System for Simulated Clinical Order Entry.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2020
    Article
  9. Article
  10. Review
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  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jason K WangMathematical and Computational Science Program, Stanford University, Stanford, CA, USA.
Jason HomDepartment of Medicine, Stanford University, Stanford, CA, USA.
Santhosh BalasubramanianDepartment of Medicine, Stanford University, Stanford, CA, USA.
Alejandro SchulerCenter for Biomedical Informatics Research, Stanford University, Stanford, CA, USA.
Nigam H ShahCenter for Biomedical Informatics Research, Stanford University, Stanford, CA, USA.
Mary K GoldsteinDepartment of Medicine, Stanford University, Stanford, CA, USA.
Michael T M BaiocchiPrevention Research Center, Stanford University, Stanford, CA, USA.
Jonathan H ChenDepartment of Medicine, Stanford University, Stanford, CA, USA; Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA. Electronic address: jonc101@stanford.edu.

Funding

POSTDOCTORAL TRAINING IN MEDICAL INFORMATION SCIENCEST15LM007033 · NLM · STANFORD UNIVERSITY · PI SYLVIA KATINA PLEVRITIS · 1985 to 2026
$25.5M
Stanford Center for Clinical and Translational Education and Research (SCCTER)UL1UL1RR025744 · NCRR · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2008 to 2011
$22.4M
Cancer Systems Biology Scholars ProgramR25CA180993 · NCI · STANFORD UNIVERSITY · PI PLEVRITIS, SYLVIA KATINA · 2014 to 2018
$2.2M
Data-Mining Clinical Decision Support from Electronic Health RecordsK01ES026837 · NIEHS · STANFORD UNIVERSITY · PI CHEN, JONATHAN H. · 2015 to 2019
$893k
NCI NIH HHS R25 CA180993NCRR NIH HHS UL1 RR025744NIEHS NIH HHS K01 ES026837
6 · The paper itself

Abstract

objectiveEvaluate the quality of clinical order practice patterns machine-learned from clinician cohorts stratified by patient mortality outcomes. MATERIALS AND

methodsInpatient electronic health records from 2010 to 2013 were extracted from a tertiary academic hospital. Clinicians (n = 1822) were stratified into low-mortality (21.8%, n = 397) and high-mortality (6.0%, n = 110) extremes using a two-sided P-value score quantifying deviation of observed vs. expected 30-day patient mortality rates. Three patient cohorts were assembled: patients seen by low-mortality clinicians, high-mortality clinicians, and an unfiltered crowd of all clinicians (n = 1046, 1046, and 5230 post-propensity score matching, respectively). Predicted order lists were automatically generated from recommender system algorithms trained on each patient cohort and evaluated against (i) real-world practice patterns reflected in patient cases with better-than-expected mortality outcomes and (ii) reference standards derived from clinical practice guidelines.

resultsAcross six common admission diagnoses, order lists learned from the crowd demonstrated the greatest alignment with guideline references (AUROC range = 0.86-0.91), performing on par or better than those learned from low-mortality clinicians (0.79-0.84, P < 10 DISCUSSION: Whether machine-learning models are trained on all clinicians or a subset of experts illustrates a bias-variance tradeoff in data usage. Defining robust metrics to assess quality based on internal (e.g. practice patterns from better-than-expected patient cases) or external reference standards (e.g. clinical practice guidelines) is critical to assess decision support content.

conclusionLearning relevant decision support content from all clinicians is as, if not more, robust than learning from a select subgroup of clinicians favored by patient outcomes.

Indexed as

Data MiningDecision Support Systems, ClinicalElectronic Health RecordsMortalityPattern Recognition, AutomatedAlgorithmsArea Under CurveDecision MakingEvidence-Based MedicineHospitalizationHumansInpatientsMachine LearningPractice Guidelines as TopicPractice Patterns, Physicians'Regression AnalysisClinical decision supportData miningElectronic health recordsMachine learningMortality

Identifiers

PMID30195660
PMCPMC6250126

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.