Evidence map›Paper›PMID 30194343›Full record

ArticleScientific reports2018

The Arabidopsis RNA Polymerase II Carboxyl Terminal Domain (CTD) Phosphatase-Like1 (CPL1) is a biotic stress susceptibility gene.

Louise F Thatcher, Rhonda Foley, Hayley J Casarotto, Ling-Ling Gao, Lars G Kamphuis, Su Melser, Karam B Singh

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. RNA-binding proteins orchestrating immunity in plants.The Plant journal : for cell and molecular biology · 2025
    Review
  2. Article
  3. Identification and Functional Analysis ofInternational journal of molecular sciences · 2024
    Article
  4. Article
  5. Review
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  7. Review
  8. Article
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  12. Article
  13. Article
  14. The ArabidopsisPlants (Basel, Switzerland) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Louise F ThatcherCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia. Louise.Thatcher@csiro.au.ORCID 0000-0001-7622-6610
Rhonda FoleyCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia.
Hayley J CasarottoCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia.
Ling-Ling GaoCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia.
Lars G KamphuisCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia.ORCID 0000-0002-9042-0513
Su MelserCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia.
Karam B SinghCSIRO Agriculture and Food, Centre for Environment and Life Sciences, Floreat, Western Australia, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crop breeding for improved disease resistance may be achieved through the manipulation of host susceptibility genes. Previously we identified multiple Arabidopsis mutants known as enhanced stress response1 (esr1) that have defects in a KH-domain RNA-binding protein and conferred increased resistance to the root fungal pathogen Fusarium oxysporum. Here, screening the same mutagenized population we discovered two further enhanced stress response mutants that also conferred enhanced resistance to F. oxysporum. These mutants also have enhanced resistance to a leaf fungal pathogen (Alternaria brassicicola) and an aphid pest (Myzus persicae), but not to the bacterial leaf pathogen Pseudomonas syringae. The causal alleles in these mutants were found to have defects in the ESR1 interacting protein partner RNA Polymerase II Carboxyl Terminal Domain (CTD) Phosphatase-Like1 (CPL1) and subsequently given the allele symbols cpl1-7 and cpl1-8. These results define a new role for CPL1 as a pathogen and pest susceptibility gene. Global transcriptome analysis and oxidative stress assays showed these cpl1 mutants have increased tolerance to oxidative stress. In particular, components of biotic stress responsive pathways were enriched in cpl1 over wild-type up-regulated gene expression datasets including genes related to defence, heat shock proteins and oxidative stress/redox state processes.

Indexed as

Oxidative StressAlternariaAnimalsAphidsArabidopsisArabidopsis ProteinsDisease ResistanceFusariumMutationPhosphoprotein PhosphatasesPlant DiseasesPlant LeavesPlant RootsPseudomonas syringaeRNA-Binding ProteinsRNA Polymerase IIArabidopsis ProteinsCPL1 protein, ArabidopsisPhosphoprotein PhosphatasesRNA-Binding ProteinsRNA Polymerase IITranscription Factors

Identifiers

PMID30194343
PMCPMC6128934

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.