Evidence map›Paper›PMID 30194301›Full record

ArticleNature communications2018

Conservation of epigenetic regulation by the MLL3/4 tumour suppressor in planarian pluripotent stem cells.

Yuliana Mihaylova, Prasad Abnave, Damian Kao, Samantha Hughes, Alvina Lai, Farah Jaber-Hijazi, Nobuyoshi Kosaka, A Aziz Aboobaker

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
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  6. Article
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  8. Article
  9. Article
  10. Purification of Planarian Stem Cells Using a Draq5-Based FACS Approach.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  11. Functional genomics in Spiralia.Briefings in functional genomics · 2023
    Article
  12. Article
  13. mCell proliferation · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Yuliana MihaylovaDepartment of Zoology, Tinbergen Building, South Parks Road, Oxford, OX1 3PS, UK.ORCID http://orcid.org/0000-0001-7568-3596
Prasad AbnaveDepartment of Zoology, Tinbergen Building, South Parks Road, Oxford, OX1 3PS, UK.ORCID http://orcid.org/0000-0002-7489-5164
Damian KaoDepartment of Zoology, Tinbergen Building, South Parks Road, Oxford, OX1 3PS, UK.
Samantha HughesHAN University of Applied Sciences, Institute of Applied Sciences, Laan van Scheut 2, 6525EM, Nijmegen, The Netherlands.
Alvina LaiDepartment of Zoology, Tinbergen Building, South Parks Road, Oxford, OX1 3PS, UK.
Farah Jaber-HijaziBeatson Institute for Cancer Research, Switchback Road, Bearsden, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0001-6094-751X
Nobuyoshi KosakaDepartment of Zoology, Tinbergen Building, South Parks Road, Oxford, OX1 3PS, UK.
A Aziz AboobakerDepartment of Zoology, Tinbergen Building, South Parks Road, Oxford, OX1 3PS, UK. Aziz.Aboobaker@zoo.ox.ac.uk.ORCID http://orcid.org/0000-0003-4902-5797
Cancer Research UK Scotland Institute · GBHAN University of Applied Sciences · NLOxford Research Group · GB

Funding

Biotechnology and Biological Sciences Research Council (BBSRC) BB/K007564/1Medical Research Council MR/M000133/1Medical Research Council (MRC) MR/M000133/1
6 · The paper itself

Abstract

Currently, little is known about the evolution of epigenetic regulation in animal stem cells. Here we demonstrate, using the planarian stem cell system to investigate the role of the COMPASS family of MLL3/4 histone methyltransferases that their function as tumor suppressors in mammalian stem cells is conserved over a long evolutionary distance. To investigate the potential conservation of a genome-wide epigenetic regulatory program in animal stem cells, we assess the effects of Mll3/4 loss of function by performing RNA-seq and ChIP-seq on the G2/M planarian stem cell population, part of which contributes to the formation of outgrowths. We find many oncogenes and tumor suppressors among the affected genes that are likely candidates for mediating MLL3/4 tumor suppression function. Our work demonstrates conservation of an important epigenetic regulatory program in animals and highlights the utility of the planarian model system for studying epigenetic regulation.

Indexed as

Epigenesis, GeneticEvolution, MolecularAnimalsHistone MethyltransferasesNeurogenesisOncogenesPlanariansPluripotent Stem CellsRegenerationTumor Suppressor ProteinsHistone MethyltransferasesTumor Suppressor Proteins

Identifiers

PMID30194301
PMCPMC6128892
OpenAlexW2891260560

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.