Evidence map›Paper›PMID 30192741›Full record

ArticleeLife2018

DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis.

Amr Nassrallah, Martin Rougée, Clara Bourbousse, Stephanie Drevensek, Sandra Fonseca, Elisa Iniesto, Ouardia Ait-Mohamed, Anne-Flore Deton-Cabanillas, Gerald Zabulon, Ikhlak Ahmed and 12 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 130 citations in OpenAlex.

  1. Article
  2. Enhanced plant bottom-up histone proteomics.Journal of experimental botany · 2026
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  7. Single-molecule views of chromatin accessibility and structure during photomorphogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
  10. ChIP-Rx: Arabidopsis Chromatin Profiling Using Quantitative ChIP-Seq.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 3 countries.

Amr Nassrallah *Centro Nacional de Biotecnología, CNB-CSIC, Madrid, Spain.ORCID https://orcid.org/0000-0002-2229-2855
Martin Rougée *Institut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Clara BourbousseInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Stephanie DrevensekInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Sandra FonsecaCentro Nacional de Biotecnología, CNB-CSIC, Madrid, Spain.ORCID http://orcid.org/0000-0002-2021-4482
Elisa IniestoCentro Nacional de Biotecnología, CNB-CSIC, Madrid, Spain.ORCID http://orcid.org/0000-0003-1662-7361
Ouardia Ait-MohamedInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Anne-Flore Deton-CabanillasInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Gerald ZabulonInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Ikhlak AhmedInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
David StroebelInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Vanessa MassonCentre de Recherche, Laboratoire de Spectrométrie de Masse Protéomique, Institut Curie PSL Research University, 75005 Paris, France.
Berangere LombardCentre de Recherche, Laboratoire de Spectrométrie de Masse Protéomique, Institut Curie PSL Research University, 75005 Paris, France.
Dominique EeckhoutDepartment of Plant Systems Biology, Ghent University, Ghent, Belgium.
Kris GevaertDepartment of Biochemistry, Ghent University, Ghent, Belgium.
Damarys LoewCentre de Recherche, Laboratoire de Spectrométrie de Masse Protéomique, Institut Curie PSL Research University, 75005 Paris, France.
Auguste GenovesioInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Cecile BreytonUniversité Grenoble Alpes, Institut de Biologie Structurale, Grenoble, France.
Geert De JaegerDepartment of Plant Systems Biology, Ghent University, Ghent, Belgium.
Chris BowlerInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.ORCID https://orcid.org/0000-0003-3835-6187
Vicente RubioCentro Nacional de Biotecnología, CNB-CSIC, Madrid, Spain.ORCID http://orcid.org/0000-0002-8800-2400
Fredy BarnecheInstitut de biologie de l'Ecole normale supérieure (IBENS), Ecole normale supérieure, CNRS, INSERM, Université PSL, Paris, France.ORCID http://orcid.org/0000-0002-7014-7097
Centre National de la Recherche Scientifique · FRCentro Nacional de Biotecnología · ESGhent University · BEUniversité Paris Sciences et Lettres · FRUniversité Paris-Sud · FRInstitut de Biologie Structurale · FR

Funding

Agence Nationale de la Recherche ANR-10-IDEX-0001-02Agence Nationale de la Recherche ANR-10-LABX-54Agence Nationale de la Recherche ANR-11-JSV2-003-01Agencia Estatal de Investigacíon/Fondo Europeo de Desarollo regional/European Union Grant BIO2016-80551-RFundación Bancaria Caixa d'Estalvis i Pensions de Barcelona PhD FellowshipMinisterio de Economía y Competitividad Grant BIO2013-46539-RMinisterio de Economía y Competitividad PhD FellowshipMinisterio de Economía y Competitividad Ramón y Cajal grant RYC-2014-16308Université Paris-Sud PhD Fellowship
6 · The paper itself

Abstract

DE-ETIOLATED 1 (DET1) is an evolutionarily conserved component of the ubiquitination machinery that mediates the destabilization of key regulators of cell differentiation and proliferation in multicellular organisms. In this study, we provide evidence from Arabidopsis that DET1 is essential for the regulation of histone H2B monoubiquitination (H2Bub) over most genes by controlling the stability of a deubiquitination module (DUBm). In contrast with yeast and metazoan DUB modules that are associated with the large SAGA complex, the Arabidopsis DUBm only comprises three proteins (hereafter named SGF11, ENY2 and UBP22) and appears to act independently as a major H2Bub deubiquitinase activity. Our study further unveils that DET1-DDB1-Associated-1 (DDA1) protein interacts with SGF11

Indexed as

HomeostasisProteolysisUbiquitinationAmino Acid SequenceArabidopsisArabidopsis ProteinsGenes, PlantHistonesIntracellular Signaling Peptides and ProteinsLightMultiprotein ComplexesMutationNuclear ProteinsOpen Reading FramesPeptidesProtein BindingArabidopsis ProteinsDET1 protein, ArabidopsisHistonesIntracellular Signaling Peptides and ProteinsMultiprotein ComplexesNuclear ProteinsPeptidesProtein SubunitsA. thalianaDET1epigenomeHistone H2B deubiquitinationlight signalingphotomorphogenesisplant biologySAGA complex

Identifiers

PMID30192741
PMCPMC6128693
OpenAlexW2798350418

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.