Evidence map›Paper›PMID 30192636›Full record

ReviewAnnual review of genetics2018

Power in Numbers: Single-Cell RNA-Seq Strategies to Dissect Complex Tissues.

Kenneth D Birnbaum

Abstract readReview
In one paragraph

Review in Annual review of genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed.

  1. Review
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Kenneth D BirnbaumCenter for Genomics and Systems Biology, New York University, New York, NY 10003, USA; email: ken.birnbaum@nyu.edu.

Funding

Mapping the Trajectory of Cell Fate TransitionsR01GM078279 · NIGMS · NEW YORK UNIVERSITY · PI BIRNBAUM, KENNETH DAVID · 2006 to 2019
$4.2M
NIGMS NIH HHS R01 GM078279
6 · The paper itself

Abstract

The growing scale and declining cost of single-cell RNA-sequencing (RNA-seq) now permit a repetition of cell sampling that increases the power to detect rare cell states, reconstruct developmental trajectories, and measure phenotype in new terms such as cellular variance. The characterization of anatomy and developmental dynamics has not had an equivalent breakthrough since groundbreaking advances in live fluorescent microscopy. The new resolution obtained by single-cell RNA-seq is a boon to genetics because the novel description of phenotype offers the opportunity to refine gene function and dissect pleiotropy. In addition, the recent pairing of high-throughput genetic perturbation with single-cell RNA-seq has made practical a scale of genetic screening not previously possible.

Indexed as

Gene Expression ProfilingGene Expression Regulation, DevelopmentalHumansMicroscopy, FluorescenceRNASequence Analysis, RNASingle-Cell AnalysisRNApooled CRISPRrare cell typessingle-cell power analysissingle-cell RNA-seqtrajectory analysis

Identifiers

PMID30192636
PMCPMC6314027

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.