Evidence map›Paper›PMID 30191514›Full record

SynthesisBrain imaging and behavior2019

A resting state fMRI analysis pipeline for pooling inference across diverse cohorts: an ENIGMA rs-fMRI protocol.

Bhim M Adhikari, Neda Jahanshad, Dinesh Shukla, Jessica Turner, Dominik Grotegerd, Udo Dannlowski, Harald Kugel, Jennifer Engelen, Bruno Dietsche, Axel Krug and 23 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Brain imaging and behavior, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
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  18. Efficient PCA denoising of spatially correlated redundant MRI data.Imaging neuroscience (Cambridge, Mass.) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Bhim M AdhikariMaryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA. badhikari@som.umaryland.edu.
Neda JahanshadImaging Genetics Center, Keck School of Medicine of USC, Marina del Rey, Los Angeles, CA, USA.
Dinesh ShuklaMaryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA.
Jessica TurnerDepartment of Psychology, Georgia State University, Atlanta, GA, USA.
Dominik GrotegerdDepartment of Psychiatry, University of Münster, Münster, Germany.
Udo DannlowskiDepartment of Psychiatry, University of Münster, Münster, Germany.
Harald KugelDepartment of Clinical Radiology, University of Münster, Münster, Germany.
Jennifer EngelenDepartment of Psychiatry and Psychotherapy, Philipps-University Marburg, Marburg, Germany.
Bruno DietscheDepartment of Psychiatry and Psychotherapy, Philipps-University Marburg, Marburg, Germany.
Axel KrugDepartment of Psychiatry and Psychotherapy, Philipps-University Marburg, Marburg, Germany.
Tilo KircherDepartment of Psychiatry and Psychotherapy, Philipps-University Marburg, Marburg, Germany.
Els FieremansCenter for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.
Jelle VeraartCenter for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.
Dmitry S NovikovCenter for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA.
Premika S W BoedhoeDepartment of Psychiatry, Department of Anatomy & Neurosciences, VU University Medical Center, Amsterdam, Netherlands.
Ysbrand D van der WerfDepartment of Psychiatry, Department of Anatomy & Neurosciences, VU University Medical Center, Amsterdam, Netherlands.
Odile A van den HeuvelDepartment of Psychiatry, Department of Anatomy & Neurosciences, VU University Medical Center, Amsterdam, Netherlands.
Jonathan IpserDepartment of Psychiatry and Mental Health, University of Cape Town, Cape Town, South Africa.
Anne UhlmannDepartment of Psychiatry and Mental Health, University of Cape Town, Cape Town, South Africa.
Dan J SteinDepartment of Psychiatry and Mental Health, University of Cape Town, Cape Town, South Africa.
Erin DickieCentre for Addiction and Mental Health, Toronto, ON, Canada.
Aristotle N VoineskosCentre for Addiction and Mental Health, Campbell Family Mental Health Research Institute, Toronto, ON, Canada.
Anil K MalhotraDepartment of Psychiatry, The Zucker Hillside Hospital, Glen Oaks, New York, NY, USA.
Fabrizio PizzagalliImaging Genetics Center, Keck School of Medicine of USC, Marina del Rey, Los Angeles, CA, USA.
Vince D CalhounThe Mind Research Network & The University of New Mexico, Albuquerque, NM, USA.
Lea WallerDepartment of Psychiatry and Psychotherapy, Charité Universitätsmedizin Berlin, Campus Matte, Berlin, Germany.
Ilja M VeerDepartment of Psychiatry and Psychotherapy, Charité Universitätsmedizin Berlin, Campus Matte, Berlin, Germany.
Hernik WalterDepartment of Psychiatry and Psychotherapy, Charité Universitätsmedizin Berlin, Campus Matte, Berlin, Germany.
Robert W BuchananMaryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA.
David C GlahnDepartment of Psychiatry, Yale University, School of Medicine, New Haven, CT, USA.
L Elliot HongMaryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA.
Paul M ThompsonImaging Genetics Center, Keck School of Medicine of USC, Marina del Rey, Los Angeles, CA, USA.
Peter KochunovMaryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA.

Funding

TR&D 4: Revealing Microstructure: Biophysical modeling and validation for discovery and clinical careP41EB017183 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Christopher M Collins · 2014 to 2026
$19.3M
Training U54EB020403 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI THOMPSON, PAUL M · 2014 to 2018
$10.1M
Mesoscopic Biomarkers of Neurodegeneration with Diffusion MRIR01NS088040 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FIEREMANS, ELS, NOVIKOV, DMITRY S · 2014 to 2023
$5.2M
SOLAR-Eclipse Computational Tools for Imaging GeneticsR01EB015611 · NIBIB · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KOCHUNOV, PETER V. · 2012 to 2024
$5.0M
Amish Connectome Project on Mental IllnessU01MH108148 · NIMH · UNIVERSITY OF MARYLAND BALTIMORE · PI HONG, L ELLIOT ELLIOT, KOCHUNOV, PETER V. · 2015 to 2018
$4.3M
Towards Multisystem-Brain Successful Aging in Schizophrenia SpectrumR01MH116948 · NIMH · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI HONG, L ELLIOT ELLIOT · 2018 to 2022
$3.7M
Shared Neural Circuitry in Comorbid Schizophrenia and Nicotine AddictionR01DA027680 · NIDA · UNIVERSITY OF MARYLAND BALTIMORE · PI HONG, L ELLIOT ELLIOT · 2010 to 2014
$2.4M
Neural Oscillatory Biomarkers for Genetics and Animal Models of SchizophreniaR01MH085646 · NIMH · UNIVERSITY OF MARYLAND BALTIMORE · PI HONG, L ELLIOT ELLIOT · 2010 to 2013
$2.2M
The Role of Stress-Immune-Connectome Disruption in Mechanisms of Chinese Early Schizophrenia SpectrumR01MH112180 · NIMH · UNIVERSITY OF MARYLAND BALTIMORE · PI HONG, L ELLIOT ELLIOT · 2017 to 2021
$1.0M
German Research Foundation FOR2107: DA 1151/5-1German Research Foundation FOR2107:KI 588/15-1German Research Foundation (DFG) FOR2017:KO 4291/4-1 and KR 3822/5-1NIBIB NIH HHS P41 EB017183NIBIB NIH HHS R01 EB015611NIBIB NIH HHS U54 EB020403NIDA NIH HHS R01 DA027680NIH HHS U54EB020403, U01MH108148, 2R01EB015611, R01MH112180, R01DA027680, R01MH085646NIMH NIH HHS R01 MH085646NIMH NIH HHS R01 MH112180NIMH NIH HHS R01 MH116948NIMH NIH HHS U01 MH108148NINDS NIH HHS R01 NS088040Postdoctoral Fellow of the Research Foundation - Flanders (FWO) 12S1615N
6 · The paper itself

Abstract

Large-scale consortium efforts such as Enhancing NeuroImaging Genetics through Meta-Analysis (ENIGMA) and other collaborative efforts show that combining statistical data from multiple independent studies can boost statistical power and achieve more accurate estimates of effect sizes, contributing to more reliable and reproducible research. A meta- analysis would pool effects from studies conducted in a similar manner, yet to date, no such harmonized protocol exists for resting state fMRI (rsfMRI) data. Here, we propose an initial pipeline for multi-site rsfMRI analysis to allow research groups around the world to analyze scans in a harmonized way, and to perform coordinated statistical tests. The challenge lies in the fact that resting state fMRI measurements collected by researchers over the last decade vary widely, with variable quality and differing spatial or temporal signal-to-noise ratio (tSNR). An effective harmonization must provide optimal measures for all quality data. Here we used rsfMRI data from twenty-two independent studies with approximately fifty corresponding T1-weighted and rsfMRI datasets each, to (A) review and aggregate the state of existing rsfMRI data, (B) demonstrate utility of principal component analysis (PCA)-based denoising and (C) develop a deformable ENIGMA EPI template based on the representative anatomy that incorporates spatial distortion patterns from various protocols and populations.

Indexed as

Image Processing, Computer-AssistedAdultAgedArtifactsBrainBrain MappingFemaleFunctional NeuroimagingHumansMagnetic Resonance ImagingMaleMiddle AgedSignal-To-Noise RatioYoung AdultENIGMA EPI templateLarge multi-site studiesProcessing pipelines

Identifiers

PMID30191514
PMCPMC6401353

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.