Evidence map›Paper›PMID 30189831›Full record

ArticleBMC microbiology2018

Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation.

Mónica A Vásquez-Piñeros, Paula M Martínez-Lavanchy, Nico Jehmlich, Dietmar H Pieper, Carlos A Rincón, Hauke Harms, Howard Junca, Hermann J Heipieper

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Applied and environmental microbiology · 2026
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  7. Phylogenomic analysis of the genusMicrobial genomics · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Mónica A Vásquez-PiñerosHelmholtz Centre for Environmental Research - UFZ, Department of Environmental Biotechnology, Permoserstr. 15, Leipzig, Germany.
Paula M Martínez-LavanchyHelmholtz Centre for Environmental Research - UFZ, Department of Environmental Biotechnology, Permoserstr. 15, Leipzig, Germany.
Nico JehmlichHelmholtz Centre for Environmental Research - UFZ, Department of Molecular Systems Biology, Leipzig, Germany.
Dietmar H PieperHelmholtz Centre for Infection Research -HZI, Microbial Interaction and Processes Research Group, Braunschweig, Germany.
Carlos A RincónHelmholtz Centre for Environmental Research - UFZ, Department of Environmental Biotechnology, Permoserstr. 15, Leipzig, Germany.
Hauke HarmsHelmholtz Centre for Environmental Research - UFZ, Department of Environmental Microbiology, Leipzig, Germany.
Howard JuncaMicrobiomas Research Foundation, Bogotá, Colombia.
Hermann J HeipieperHelmholtz Centre for Environmental Research - UFZ, Department of Environmental Biotechnology, Permoserstr. 15, Leipzig, Germany. hermann.heipieper@ufz.de.ORCID 0000-0002-3723-9600
Helmholtz Centre for Environmental Research · DEHelmholtz Centre for Infection Research · DEMicrobiomas Foundation · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDimethylphenols (DMP) are toxic compounds with high environmental mobility in water and one of the main constituents of effluents from petro- and carbochemical industry. Over the last few decades, the use of constructed wetlands (CW) has been extended from domestic to industrial wastewater treatments, including petro-carbochemical effluents. In these systems, the main role during the transformation and mineralization of organic pollutants is played by microorganisms. Therefore, understanding the bacterial degradation processes of isolated strains from CWs is an important approach to further improvements of biodegradation processes in these treatment systems.

resultsIn this study, bacterial isolation from a pilot scale constructed wetland fed with phenols led to the identification of Delftia sp. LCW as a DMP degrading strain. The strain was able to use the o-xylenols 3,4-DMP and 2,3-DMP as sole carbon and energy sources. In addition, 3,4-DMP provided as a co-substrate had an effect on the transformation of other four DMP isomers. Based on the detection of the genes, proteins, and the inferred phylogenetic relationships of the detected genes with other reported functional proteins, we found that the phenol hydroxylase of Delftia sp. LCW is induced by 3,4-DMP and it is responsible for the first oxidation of the aromatic ring of 3,4-, 2,3-, 2,4-, 2,5- and 3,5-DMP. The enzyme may also catalyze both monooxygenation reactions during the degradation of benzene. Proteome data led to the identification of catechol meta cleavage pathway enzymes during the growth on ortho DMP, and validated that cleavage of the aromatic rings of 2,5- and 3,5-DMPs does not result in mineralization. In addition, the tolerance of the strain to high concentrations of DMP, especially to 3,4-DMP was higher than that of other reported microorganisms from activated sludge treating phenols.

conclusionsLCW strain was able to degraded complex aromatics compounds. DMPs and benzene are reported for the first time to be degraded by a member of Delftia genus. In addition, LCW degraded DMPs with a first oxidation of the aromatic rings by a phenol hydroxylase, followed by a further meta cleavage pathway. The higher resistance to DMP toxicity, the ability to degrade and transform DMP isomers and the origin as a rhizosphere bacterium from wastewater systems, make LCW a suitable candidate to be used in bioremediation of complex DMP mixtures in CWs systems.

Indexed as

Bacterial ProteinsBiodegradation, EnvironmentalDelftiaIsomerismMixed Function OxygenasesPhenolsPhylogenySoil MicrobiologyWetlandsBacterial ProteinsMixed Function Oxygenasesphenol 2-monooxygenasePhenolsBiodegradationConstructed wetlandsDelftia sp.Phenol hydroxylaseToxicityXylenols

Identifiers

PMID30189831
PMCPMC6127914
OpenAlexW2891654251

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.