Evidence map›Paper›PMID 30188508›Full record

ArticlePediatric research2018

Sarcomere gene variants act as a genetic trigger underlying the development of left ventricular noncompaction.

Asami Takasaki, Keiichi Hirono, Yukiko Hata, Ce Wang, Masafumi Takeda, Jun K Yamashita, Bo Chang, Hideyuki Nakaoka, Mako Okabe, Nariaki Miyao and 8 more

Open access · bronzeAbstract read
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In one paragraph

Article in Pediatric research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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  12. Mutations in RNA Methyltransferase GeneFrontiers in cell and developmental biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Asami TakasakiDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Keiichi HironoDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Yukiko HataDepartment of Legal Medicine, University of Toyama, Toyama, Japan.
Ce WangDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Masafumi TakedaDepartment of Stem Cell Growth and Differentiation, Center for iPS Cell Research and Application (CiRA), Kyoto University, Kyoto, Japan.
Jun K YamashitaDepartment of Stem Cell Growth and Differentiation, Center for iPS Cell Research and Application (CiRA), Kyoto University, Kyoto, Japan.
Bo ChangDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Hideyuki NakaokaDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Mako OkabeDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Nariaki MiyaoDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Kazuyoshi SaitoDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Keijiro IbukiDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Sayaka OzawaDepartment of Pediatrics, University of Toyama, Toyama, Japan.
Michikazu SekineDepartment of Epidemiology and Health Policy, University of Toyama, Toyama, Japan.
Naoki YoshimuraDepartment of Thoracic and Cardiovascular Surgery, University of Toyama, Toyama, Japan.
Naoki NishidaDepartment of Legal Medicine, University of Toyama, Toyama, Japan.
Neil E BowlesDepartment of Pediatrics (Cardiology), University of Utah, Salt Lake City, UT, USA.
Fukiko IchidaDepartment of Pediatrics, University of Toyama, Toyama, Japan. fkichida@ctg.u-toyama.ac.jp.
University of Toyama · JPKyoto University · JPUniversity of Utah · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeft ventricular noncompaction (LVNC) is a primary cardiomyopathy with heterogeneous genetic origins. The aim of this study was to elucidate the role of sarcomere gene variants in the pathogenesis and prognosis of LVNC. METHODS AND

resultsWe screened 82 Japanese patients (0-35 years old), with a diagnosis of LVNC, for mutations in seven genes encoding sarcomere proteins, by direct DNA sequencing. We identified variants in a significant proportion of cases (27%), which were associated with poor prognosis (p = 0.012), particularly variants in TPM1, TNNC1, and ACTC1 (p = 0.012). To elucidate the pathological role, we developed and studied human-induced pluripotent stem cells (hiPSCs) from a patient carrying a TPM1 p.Arg178His mutation, who underwent heart transplantation. These cells displayed pathological changes, with mislocalization of tropomyosin 1, causing disruption of the sarcomere structure in cardiomyocytes, and impaired calcium handling. Microarray analysis indicated that the TPM1 mutation resulted in the down-regulation of the expression of numerous genes involved in heart development, and positive regulation of cellular process, especially the calcium signaling pathway.

conclusionsSarcomere genes are implicated as genetic triggers in the development of LVNC, regulating the expression of numerous genes involved in heart development, or modifying the severity of disease.

Indexed as

AdolescentAdultAsian PeopleCalcium SignalingChildChild, PreschoolFemaleHeart VentriclesHumansInfantInfant, NewbornJapanMaleMutationPrognosisSarcomeres

Identifiers

PMID30188508
OpenAlexW2891475703

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.