Evidence map›Paper›PMID 30188322›Full record

ArticleeLife2018

Transcriptional and epigenomic landscapes of CNS and non-CNS vascular endothelial cells.

Mark F Sabbagh, Jacob S Heng, Chongyuan Luo, Rosa G Castanon, Joseph R Nery, Amir Rattner, Loyal A Goff, Joseph R Ecker, Jeremy Nathans

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 167 papers.

0numbers the graph read from it
0cells of the map it votes in
167citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

167 citing papers in PubMed, 263 citations in OpenAlex.

  1. Article
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  4. BBB-Permeable PROTACs: Where Do We Stand?ACS medicinal chemistry letters · 2026
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  5. The CNS Meninges and the Synovial Joint: Parallel Immunological Structures in Autoimmune Disease.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
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  7. Development of the blood-brain barrier.Development (Cambridge, England) · 2026
    Review
  8. Article
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  10. Review
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  13. The blood-brain barrier: a help and a hindrance.Brain : a journal of neurology · 2025
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Microenvironmental determinants of endothelial cell heterogeneity.Nature reviews. Molecular cell biology · 2025
    Review
  19. Article
  20. Article

107 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Mark F SabbaghDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, United States.ORCID 0000-0003-1996-5251
Jacob S HengDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, United States.ORCID 0000-0001-6291-6688
Chongyuan LuoGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, United States.ORCID 0000-0002-8541-0695
Rosa G CastanonGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, United States.
Joseph R NeryGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, United States.
Amir RattnerDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, United States.
Loyal A GoffDepartment of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, United States.ORCID 0000-0003-2875-451X
Joseph R EckerGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, United States.ORCID 0000-0001-5799-5895
Jeremy NathansDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, United States.ORCID 0000-0001-8106-5460
Johns Hopkins University · USSalk Institute for Biological Studies · USHoward Hughes Medical Institute · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007309 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 1985 to 2019
$43.2M
The control of retinal vascular development by Norrin and Frizzled4R01EY018637 · NEI · JOHNS HOPKINS UNIVERSITY · PI NATHANS, JEREMY · 2008 to 2021
$5.5M
Cell Competition in the Developing Mammalian Central Nervous System VasculatureF30HD088023 · NICHD · JOHNS HOPKINS UNIVERSITY · PI SABBAGH, MARK FARES · 2016 to 2018
$147k
Eunice Kennedy Shriver National Institute of Child Health and Human Development F30HD088023Howard Hughes Medical InstituteJohns Hopkins University Science of Learning and Synergy AwardsMaryland Stem Cell Research Fund 2016-MSCRFI-2805National Science Foundation IOS-1665692NEI NIH HHS R01 EY018637NEI NIH HHS R01EY018637NICHD NIH HHS F30 HD088023NIGMS NIH HHS T32 GM007309
6 · The paper itself

Abstract

Vascular endothelial cell (EC) function depends on appropriate organ-specific molecular and cellular specializations. To explore genomic mechanisms that control this specialization, we have analyzed and compared the transcriptome, accessible chromatin, and DNA methylome landscapes from mouse brain, liver, lung, and kidney ECs. Analysis of transcription factor (TF) gene expression and TF motifs at candidate

Indexed as

Epigenesis, GeneticTranscription, GeneticAmino Acid MotifsAnimalsBase SequenceBrainCentral Nervous SystemChromatinDNA MethylationDopa DecarboxylaseEndothelial CellsGreen Fluorescent ProteinsLiverLungMaleMice, TransgenicChromatinDopa DecarboxylaseGreen Fluorescent ProteinsRNA, MessengerTranscription Factorsaccessible chromatinblood-brain barrierchromosomesDNA methylationgene expressionmouseneurosciencesingle cell RNA-seqvascular endothelial cellWnt

Identifiers

PMID30188322
PMCPMC6126923
OpenAlexW2891097099

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.