Evidence map›Paper›PMID 30188321›Full record

ArticleeLife2018

Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin.

Angela M Phillips, Michael B Doud, Luna O Gonzalez, Vincent L Butty, Yu-Shan Lin, Jesse D Bloom, Matthew D Shoulders

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Failed Cellular Surveillance Enables Pathogenic Matrix Deposition in abioRxiv : the preprint server for biology · 2025
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  15. Article
  16. Article
  17. Influenza A viruses balance ER stress with host protein synthesis shutoff.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Review
  19. Review
  20. HSF1 Activation Can Restrict HIV Replication.ACS infectious diseases · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Angela M PhillipsDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, United States.ORCID http://orcid.org/0000-0002-9806-7574
Michael B DoudFred Hutchinson Cancer Research Center, Seattle, United States.ORCID http://orcid.org/0000-0002-8172-6342
Luna O GonzalezDepartment of Mathematics, Massachusetts Institute of Technology, Cambridge, United States.
Vincent L ButtyBioMicro Center, Massachusetts Institute of Technology, Cambridge, United States.
Yu-Shan LinDepartment of Chemistry, Tufts University, Medford, United States.ORCID http://orcid.org/0000-0001-6460-2877
Jesse D BloomFred Hutchinson Cancer Research Center, Seattle, United States.ORCID http://orcid.org/0000-0003-1267-3408
Matthew D ShouldersDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, United States.ORCID http://orcid.org/0000-0002-6511-3431
Massachusetts Institute of Technology · USUniversity of Washington · USTufts University · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Angela Nicole Koehler · 1985 to 2026
$93.9M
University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 1985 to 2020
$25.6M
Continuous Directed Evolution of Biomolecules in Human Cells for Medical ResearchDP2GM119162 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SHOULDERS, MATTHEW DONALD · 2015 to 2015
$2.3M
High-throughput experiments to guide influenza vaccine strain selectionR01AI127893 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BLOOM, JESSE D · 2016 to 2020
$2.1M
FHCRC High-Performance Computing ClusterS10OD020069 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI KOOPERBERG, CHARLES L · 2015 to 2015
$600k
Howard Hughes Medical Institute Faculty Scholars grantNCI NIH HHS Koch Institute Support (core) Grant P30-CA14051NCI NIH HHS P30 CA014051NIAID NIH HHS R01 AI127893NIEHS NIH HHS MIT Center for Environmental Health Sciences (core) Grant P30-ES002109NIEHS NIH HHS P30 ES002109NIGMS NIH HHS DP2 GM119162NIGMS NIH HHS T32 GM007266NIH HHS 1DP2GM119162NIH HHS Al127893NIH HHS S10 OD020069
6 · The paper itself

Abstract

We systematically and quantitatively evaluate whether endoplasmic reticulum (ER) proteostasis factors impact the mutational tolerance of secretory pathway proteins. We focus on influenza hemaggluttinin (HA), a viral membrane protein that folds in the host's ER via a complex pathway. By integrating chemical methods to modulate ER proteostasis with deep mutational scanning to assess mutational tolerance, we discover that upregulation of ER proteostasis factors broadly enhances HA mutational tolerance across diverse structural elements. Remarkably, this proteostasis network-enhanced mutational tolerance occurs at the same sites where mutational tolerance is most reduced by propagation at fever-like temperature. These findings have important implications for influenza evolution, because influenza immune escape is contingent on HA possessing sufficient mutational tolerance to evade antibodies while maintaining the capacity to fold and function. More broadly, this work provides the first experimental evidence that ER proteostasis mechanisms define the mutational tolerance and, therefore, the evolution of secretory pathway proteins.

Indexed as

MutationProteostasisTemperatureAmino Acid SequenceEndoplasmic ReticulumEndoplasmic Reticulum StressGene Expression ProfilingHEK293 CellsHemagglutinin Glycoproteins, Influenza VirusHumansSecretory PathwayUnfolded Protein ResponseHemagglutinin Glycoproteins, Influenza Virusbiochemistrychemical biologyevolutionevolutionary biologyhumaninfluenzamembrane proteinprotein foldingproteostasisunfolded protein responsevirus

Identifiers

PMID30188321
PMCPMC6172027
OpenAlexW2890646813

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.