Evidence map›Paper›PMID 30186292›Full record

ArticleFrontiers in plant science2018

Genome-Wide Association Studies for Five Forage Quality-Related Traits in Sorghum (

Jieqin Li, Weijie Tang, Ya-Wen Zhang, Kai-Ning Chen, Chenchen Wang, Yanlong Liu, Qiuwen Zhan, Chunming Wang, Shi-Bo Wang, Shang-Qian Xie and 1 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
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  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Pearl millet a promising fodder crop for changing climate: a review.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. OMICS in Fodder Crops: Applications, Challenges, and Prospects.Current issues in molecular biology · 2022
    Review
  15. Article
  16. Article
  17. Review
  18. Genome-wide association study for grain mineral content in a Brazilian common bean diversity panel.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  19. Sorghum breeding in the genomic era: opportunities and challenges.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jieqin LiCollege of Agriculture, Anhui Science and Technology University, Fengyang, China.
Weijie TangCollege of Horticulture, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, China.
Ya-Wen ZhangCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Kai-Ning ChenCollege of Horticulture, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, China.
Chenchen WangCollege of Agriculture, Anhui Science and Technology University, Fengyang, China.
Yanlong LiuCollege of Agriculture, Anhui Science and Technology University, Fengyang, China.
Qiuwen ZhanCollege of Agriculture, Anhui Science and Technology University, Fengyang, China.
Chunming WangNational Key Laboratory of Crop Genetics and Germplasm Enhancement, Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing, China.
Shi-Bo WangCollege of Horticulture, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, China.
Shang-Qian XieCollege of Horticulture, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, China.
Lihua WangCollege of Agriculture, Anhui Science and Technology University, Fengyang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the genetic function of the forage quality-related traits, including crude protein (CP), neutral detergent fiber (NDF), acid detergent fiber (ADF), hemicellulose (HC), and cellulose (CL) contents, is essential for the identification of forage quality genes and selection of effective molecular markers in sorghum. In this study, we genotyped 245 sorghum accessions by 85,585 single-nucleotide polymorphisms (SNPs) and obtained the phenotypic data from four environments. The SNPs and phenotypic data were applied to multi-locus genome-wide association studies (GWAS) with the mrMLM software. A total of 42 SNPs were identified to be associated with the five forage quality-related traits. Moreover, three and two quantitative trait nucleotides (QTNs) were simultaneously detected among them by three and two multi-locus methods, respectively. One QTN on chromosome 5 was found to be associated simultaneously with CP, NDF, and ADF. Furthermore, 3, 2, 2, 5, and 2 candidate genes were identified to be responsible for CP, NDF, ADF, HC, and CL contents, respectively. These results provided insightful information of the forage quality-related traits and would facilitate the genetic improvement of sorghum forage quality in the future.

Indexed as

forage quality-related traitsGWASmrMLMQTNssorghum

Identifiers

PMID30186292
PMCPMC6111974

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.