Evidence map›Paper›PMID 30186248›Full record

ArticleFrontiers in microbiology2018

Phylogenomic Classification and the Evolution of Clonal Complex 5 Methicillin-Resistant

Lavanya Challagundla, Jinnethe Reyes, Iftekhar Rafiqullah, Daniel O Sordelli, Gabriela Echaniz-Aviles, Maria E Velazquez-Meza, Santiago Castillo-Ramírez, Nahuel Fittipaldi, Michael Feldgarden, Sinéad B Chapman and 8 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 111 citations in OpenAlex.

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  17. Whole genome sequencing and molecular epidemiology of methicillin-resistant Staphylococcus aureus isolated from patients with bacteraemia in Slovenia.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
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  20. Different evolution ofHeliyon · 2024
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 11 institutions in 5 countries.

Lavanya ChallagundlaDepartment of Data Science, University of Mississippi Medical Center, Jackson, MS, United States.
Jinnethe ReyesMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogota, Colombia.
Iftekhar RafiqullahDepartment of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, MS, United States.
Daniel O SordelliInstituto de Investigaciones en Microbiología y Parasitología Médica, Universidad de Buenos Aires and Consejo Nacional de Investigaciones Ciencias y Tecnicas, Buenos Aires, Argentina.
Gabriela Echaniz-AvilesDepartment of Vaccine Evaluation, Instituto Nacional de Salud Pública, Cuernavaca, Mexico.
Maria E Velazquez-MezaDepartment of Vaccine Evaluation, Instituto Nacional de Salud Pública, Cuernavaca, Mexico.
Santiago Castillo-RamírezPrograma de Genómica Evolutiva, Centro de Ciencias Génomicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico.
Nahuel FittipaldiPublic Health Ontario Laboratory, Toronto, ON, Canada.
Michael FeldgardenNational Center for Biotechnology Information, National Institutes of Health, Bethesda, MD, United States.
Sinéad B ChapmanBroad Institute of MIT and Harvard, Cambridge, MA, United States.
Michael S CalderwoodSection of Infectious Disease and International Health, Dartmouth-Hitchcock Medical Center, Lebanon, NH, United States.
Lina P CarvajalMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogota, Colombia.
Sandra RinconMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogota, Colombia.
Blake HansonDivision of Infectious Diseases and Center for Antimicrobial Resistance and Microbial Genomics, University of Texas Health Science Center, McGovern Medical School, Houston, TX, United States.
Paul J PlanetChildren's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, PA, United States.
Cesar A AriasMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogota, Colombia.
Lorena DiazMolecular Genetics and Antimicrobial Resistance Unit, International Center for Microbial Genomics, Universidad El Bosque, Bogota, Colombia.
D Ashley RobinsonDepartment of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, MS, United States.
Universidad El Bosque · COUniversity of Mississippi Medical Center · USInstituto Nacional de Salud Pública · MXBroad Institute · USDartmouth–Hitchcock Medical Center · USNational Center for Biotechnology Information · USThe University of Texas Health Science Center at Houston · USUniversidad Nacional Autónoma de México · MXUniversity of Buenos Aires · ARUniversity of Pennsylvania · USUniversity of Toronto · CA

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI Jacques J. Kessl · 2012 to 2026
$60.2M
Role of obesity in preeclamptic pregnancy.P20GM121334 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI Ashley C. Johnson, Babbette LaMarca · 2017 to 2026
$26.4M
The role of leptin in autoimmune-associated hypertensionP20GM104357 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI TAYLOR, ERIN BASSFORD · 2013 to 2022
$23.4M
Center for Psychiatric NeuroscienceP30GM103328 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI STOCKMEIER, CRAIG ALLEN · 2013 to 2017
$5.5M
The LiaFSR system and antimicrobial peptide resistance in enterococciR01AI134637 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Cesar Augusto Arias · 2018 to 2026
$3.7M
Population Genomics of StaphylococciR01GM080602 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI ROBINSON, DAVID ASHLEY · 2007 to 2016
$1.8M
Bacterial Interference to Prevent Staphylococcus aureus InfectionR01AI137526 · NIAID · CHILDREN'S HOSP OF PHILADELPHIA · PI PLANET, PAUL J · 2018 to 2021
$1.7M
POR Program on Genomic Prediction of Antimicrobial Resistance in VREK24AI121296 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ARIAS, CESAR AUGUSTO · 2016 to 2025
$1.5M
Molecular basis of the cefazolin inoculum effectR21AI143229 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ARIAS, CESAR AUGUSTO · 2019 to 2020
$442k
NIAID NIH HHS HHSN272200900018CNIAID NIH HHS K24 AI121296NIAID NIH HHS R01 AI134637NIAID NIH HHS R01 AI137526NIAID NIH HHS R21 AI143229NIGMS NIH HHS P20 GM103476NIGMS NIH HHS P20 GM104357NIGMS NIH HHS P20 GM121334NIGMS NIH HHS P30 GM103328NIGMS NIH HHS R01 GM080602
6 · The paper itself

Abstract

Clonal complex 5 methicillin-resistant

Indexed as

convergent evolutionlocal adaptationmethicillin-resistant Staphylococcus aureusMRSAphylogenomics

Identifiers

PMID30186248
PMCPMC6113392
OpenAlexW2888603261

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.