ArticleScientific reports2018
Barley RNA viromes in six different geographical regions in Korea.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed, 27 citations in OpenAlex.
- Exploring the Peanut Viromes Across 15 Cultivars in Korea.International journal of molecular sciences · 2026Article
- First complete genome sequences and transcript expression profiling of tea plant necrotic ring blotch virus isolates from Iran.PloS one · 2026Article
- Hidden diversity of yellow dwarf viruses in Australian cereals.Archives of virology · 2025Article
- Genome sequence of a polerovirus isolated from wild oat in Australia.Microbiology resource announcements · 2024Article
- Analysis of Wheat Virome in Korea Using Illumina and Oxford Nanopore Sequencing Platforms.Plants (Basel, Switzerland) · 2023Article
- Translating virome analyses to support biosecurity, on-farm management, and crop breeding.Frontiers in plant science · 2023Review
- Metatranscriptomic Analysis of Plant Viruses in Imported Pear and Kiwifruit Pollen.The plant pathology journal · 2022Article
- Rapid and Visual Detection of Barley Yellow Dwarf Virus by Reverse Transcription Recombinase Polymerase Amplification with Lateral Flow Strips.The plant pathology journal · 2022Article
- Identification of Viruses Infecting Oats in Korea by Metatranscriptomics.Plants (Basel, Switzerland) · 2022Article
- Genomic diversity of Areca Palm Velarivirus 1 (APV1) in Areca palm (Areca catechu) plantations in Hainan, China.BMC genomics · 2021Article
- Identification of Plant Viruses Infecting Pear Using RNA Sequencing.The plant pathology journal · 2021Article
- Use of High-Throughput Sequencing and Two RNA Input Methods to Identify Viruses Infecting Tomato Crops.Microorganisms · 2021Article
- Identification of a Novel Quinvirus in the FamilyFrontiers in microbiology · 2021Article
- Soybean Viromes in the Republic of Korea Revealed by RT-PCR and Next-Generation Sequencing.Microorganisms · 2020Article
- Identification of Viruses and Viroids Infecting Tomato and Pepper Plants in Vietnam by Metatranscriptomics.International journal of molecular sciences · 2020Article
- Bymovirus-induced yellow mosaic diseases in barley and wheat: viruses, genetic resistances and functional aspects.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Review
- A bushel of viruses: Identification of seventeen novel putative viruses by RNA-seq in six apple trees.PloS one · 2020Article
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Authors and funding
6 authors at 2 institutions in 2 countries.
Funding
Abstract
Barley is a kind of cereal grass belonging to the family Poaceae. To examine viruses infecting winter barley in Korea, we carried out a comprehensive study of barley RNA viromes using next-generation sequencing (NGS). A total of 110 barley leaf samples from 17 geographical locations were collected. NGS followed by extensive bioinformatics analyses revealed six different barley viromes: Barley yellow mosaic virus (BaYMV), Barley mild mosaic virus (BaMMV), Barley yellow dwarf virus (BYDV), Hordeum vulgare endornavirus (HvEV), and Barley virus G (BVG). BaYMV and HvEV were identified in all libraries, while other viruses were identified in some specific library. Based on the number of virus-associated reads, BaYMV was a dominant virus infecting winter barley in Korea causing yellow disease symptoms. We obtained nearly complete genomes of six BaYMV isolates and two BaMMV isolates. Phylogenetic analyses indicate that BaYMV and BaMMV were largely grouped based on geographical regions such as Asia and Europe. Single nucleotide polymorphisms analyses suggested that most BaYMV and BaMMV showed strong genetic variations; however, BaYMV isolate Jeonju and BaMMV isolate Gunsan exhibited a few and no SNPs, respectively, suggesting low level of genetic variation. Taken together, this is the first study of barley RNA viromes in Korea.
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