Evidence map›Paper›PMID 30185895›Full record

ArticleScientific reports2018

Bright GFP with subnanosecond fluorescence lifetime.

Anastasia V Mamontova, Ilya D Solovyev, Alexander P Savitsky, Alexander М Shakhov, Konstantin A Lukyanov, Alexey M Bogdanov

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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  19. Live imagingSTAR protocols · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anastasia V MamontovaShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.
Ilya D SolovyevBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Alexander P SavitskyBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-6820-2341
Alexander М ShakhovSemenov Institute of Chemical Physics, Moscow, Russia.ORCID 0000-0002-0958-2903
Konstantin A LukyanovShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.
Alexey M BogdanovShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia. noobissat@ya.ru.ORCID 0000-0002-5346-789X

Funding

Ministry of Education and Science of the Russian Federation RFMEFI62117X0018Russian Foundation for Basic Research (RFBR) 17-00-00401Russian Foundation for Basic Research (RFBR) 17-00-00403
6 · The paper itself

Abstract

Fluorescence lifetime imaging microscopy (FLIM) measures fluorescence decay rate at every pixel of an image. FLIM can separate probes of the same color but different fluorescence lifetimes (FL), thus it is a promising approach for multiparameter imaging. However, available GFP-like fluorescent proteins (FP) possess a narrow range of FLs (commonly, 2.3-3.5 ns) which limits their applicability for multiparameter FLIM. Here we report a new FP probe showing both subnanosecond fluorescence lifetime and exceptional fluorescence brightness (80% of EGFP). To design this probe we applied semi-rational amino acid substitutions selection. Critical positions (Thr65, Tyr145, Phe165) were altered based on previously reported effect on FL or excited state electron transfer. The resulting EGFP triple mutant, BrUSLEE (Bright Ultimately Short Lifetime Enhanced Emitter), allows for both reliable detection of the probe and recording FL signal clearly distinguishable from that of the spectrally similar commonly used GFPs. We demonstrated high performance of this probe in multiparameter FLIM experiment. We suggest that amino acid substitutions described here lead to a significant shift in radiative and non-radiative excited state processes equilibrium.

Indexed as

Directed Molecular EvolutionFluorescenceGreen Fluorescent ProteinsHeLa CellsHumansMicroscopy, FluorescenceMutagenesis, Site-DirectedMutationOptical ImagingTime Factorsenhanced green fluorescent proteinGreen Fluorescent Proteins

Identifiers

PMID30185895
PMCPMC6125319

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.