Evidence map›Paper›PMID 30185826›Full record

ArticleCell death and differentiation2018

Topology of active, membrane-embedded Bax in the context of a toroidal pore.

Stephanie Bleicken, Tufa E Assafa, Carolin Stegmueller, Alice Wittig, Ana J Garcia-Saez, Enrica Bordignon

Abstract read
In one paragraph

Article in Cell death and differentiation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Membrane Pore Formation by Peptides Studied by Fluorescence Techniques.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Mechanisms of BCL-2 family proteins in mitochondrial apoptosis.Nature reviews. Molecular cell biology · 2023
    Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Physiological and pharmacological modulation of BAX.Trends in pharmacological sciences · 2022
    Review
  13. Article
  14. Article
  15. Lipids modulate the BH3-independent membrane targeting and activation of BAX and Bcl-xL.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Stephanie BleickenDepartment of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstr. 150, 44801, Bochum, Germany. stephanie.bleicken@rub.de.
Tufa E AssafaDepartment of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstr. 150, 44801, Bochum, Germany.
Carolin StegmuellerInterfaculty Institute of Biochemistry, Eberhard Karls University Tübingen, Hoppe-Seyler-Str. 4, 72076, Tübingen, Germany.
Alice WittigDepartment of Physics, Freie Universität Berlin, Arnimallee 14, 14195, Berlin, Germany.
Ana J Garcia-SaezInterfaculty Institute of Biochemistry, Eberhard Karls University Tübingen, Hoppe-Seyler-Str. 4, 72076, Tübingen, Germany.
Enrica BordignonDepartment of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstr. 150, 44801, Bochum, Germany. enrica.bordignon@rub.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bax is a Bcl-2 protein critical for apoptosis induction. In healthy cells, Bax is mostly a monomeric, cytosolic protein, while upon apoptosis initiation it inserts into the outer mitochondrial membrane, oligomerizes, and forms pores that release proapoptotic factors like Cytochrome c into the cytosol. The structures of active Bax and its homolog Bak are only partially understood and the topology of the proteins with respect to the membrane bilayer is controversially described in the literature. Here, we systematically review and examine the protein-membrane, protein-water, and protein-protein contacts of the nine helices of active Bax and Bak, and add a new set of topology data obtained by fluorescence and EPR methods. We conclude based on the consistent part of the datasets that the core/dimerization domain of Bax (Bak) is water exposed with only helices 4 and 5 in membrane contact, whereas the piercing/latch domain is in peripheral membrane contact, with helix 9 being transmembrane. Among the available structural models, those considering the dimerization/core domain at the rim of a toroidal pore are the most plausible to describe the active state of the proteins, although the structural flexibility of the piercing/latch domain does not allow unambiguous discrimination between the existing models.

Indexed as

bcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinDimerizationHumansMitochondrial MembranesProtein Conformation, alpha-HelicalProtein Structure, Tertiarybcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer Protein

Identifiers

PMID30185826
PMCPMC6180131

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.