Evidence map›Paper›PMID 30185430›Full record

ArticleGenetics2018

Genotyping Polyploids from Messy Sequencing Data.

David Gerard, Luis Felipe Ventorim Ferrão, Antonio Augusto Franco Garcia, Matthew Stephens

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 207 citations in OpenAlex.

  1. Article
  2. DNA extraction from sweetpotato (Molecular breeding : new strategies in plant improvement · 2026
    Article
  3. Review
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50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

David GerardDepartment of Mathematics and Statistics, American University, Washington, DC 20016 dgerard@american.edu.ORCID 0000-0001-9450-5023
Luis Felipe Ventorim FerrãoHorticultural Sciences Department, University of Florida, Gainesville, Florida 32611.ORCID 0000-0002-9655-4838
Antonio Augusto Franco GarciaDepartment of Genetics, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, 13418-900, Brazil.ORCID 0000-0003-0634-3277
Matthew StephensDepartment of Human Genetics, University of Chicago, Illinois 60637.ORCID 0000-0001-5397-9257
American University · USUniversidade de São Paulo · BRUniversity of Chicago · USUniversity of Florida · US

Funding

Genome analysis: statistical methods and applicationsR01HG002585 · NHGRI · UNIVERSITY OF WASHINGTON · PI MATTHEW STEPHENS · 2002 to 2026
$8.4M
Genome analysis: statistical methods and applicationsR56HG002585 · NHGRI · UNIVERSITY OF CHICAGO · PI STEPHENS, MATTHEW · 2023 to 2023
$292k
NHGRI NIH HHS R01 HG002585NHGRI NIH HHS R56 HG002585
6 · The paper itself

Abstract

Detecting and quantifying the differences in individual genomes (

Indexed as

High-Throughput Nucleotide SequencingPolyploidyAllelesGenotyping TechniquesIpomoea batatasModels, GeneticPolymorphism, Single NucleotideGBShierarchical modelingRAD-Seqread-mapping biassequencing

Identifiers

PMID30185430
PMCPMC6218231
OpenAlexW2890314848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.