ArticlePloS one2018
Organellar genome analysis reveals endosymbiotic gene transfers in tomato.
Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed, 23 citations in OpenAlex.
- The mitochondrial genome of the soil pH-indicator plant Hydrangea macrophylla provides insights into mitogenome variation and evolution in superasterids.BMC plant biology · 2026Article
- The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2026Article
- Copy Number Variation Shapes Structural Genomic Diversity Associated With Ecological Adaptation in the Wild Tomato Solanum chilense.Molecular biology and evolution · 2025Article
- Mitochondrial genome recombination in somatic hybrids of Solanum commersonii and S. tuberosum.Scientific reports · 2022Article
- Tiara: deep learning-based classification system for eukaryotic sequences.Bioinformatics (Oxford, England) · 2022Article
- Structural Mutations in the Organellar Genomes ofInternational journal of molecular sciences · 2021Article
- Plastid Transformation in Tomato: A Vegetable Crop and Model Species.Methods in molecular biology (Clifton, N.J.) · 2021Article
- Fruit quality and DNA methylation are affected by parental order in reciprocal crosses of tomato.Plant cell reports · 2021Article
- Nuclear Integrants of Organellar DNA Contribute to Genome Structure and Evolution in Plants.International journal of molecular sciences · 2020Review
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We assembled three complete mitochondrial genomes (mitogenomes), two of Solanum lycopersicum and one of Solanum pennellii, and analyzed their intra- and interspecific variations. The mitogenomes were 423,596-446,257 bp in length. Despite numerous rearrangements between the S. lycopersicum and S. pennellii mitogenomes, over 97% of the mitogenomes were similar to each other. These mitogenomes were compared with plastid and nuclear genomes to investigate genetic material transfers among DNA-containing organelles in tomato. In all mitogenomes, 9,598 bp of plastome sequences were found. Numerous nuclear copies of mitochondrial DNA (NUMTs) and plastid DNA (NUPTs) were observed in the S. lycopersicum and S. pennellii nuclear genomes. Several long organellar DNA fragments were tightly clustered in the nuclear genome; however, the NUMT and NUPT locations differed between the two species. Our results demonstrate the recent occurrence of frequent endosymbiotic gene transfers in tomato genomes.
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