Evidence map›Paper›PMID 30182148›Full record

ArticleExtremophiles : life under extreme conditions2018

A metabolic and genomic assessment of sugar fermentation profiles of the thermophilic Thermotogales, Fervidobacterium pennivorans.

Scott Wushke, Brian Fristensky, Xiang Li Zhang, Vic Spicer, Oleg V Krokhin, David B Levin, Matthew B Stott, Richard Sparling

Abstract read
PubMed Publisher
In one paragraph

Article in Extremophiles : life under extreme conditions, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Scott WushkeDepartment of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.
Brian FristenskyDepartment Plant Science, University of Manitoba, Winnipeg, MB, Canada.
Xiang Li ZhangDepartment Plant Science, University of Manitoba, Winnipeg, MB, Canada.
Vic SpicerDepartment Physics and Astronomy, University of Manitoba, Winnipeg, MB, Canada.
Oleg V KrokhinDepartment of Internal Medicine and Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, Winnipeg, MB, Canada.
David B LevinDepartment of Biosystems Engineering, University of Manitoba, Winnipeg, MB, Canada.
Matthew B StottGeomicrobiology Research Group, GNS Science, Wairakei, New Zealand.
Richard SparlingDepartment of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada. richard.sparling@ad.umanitoba.ca.ORCID http://orcid.org/0000-0002-0500-5877

Funding

Genome Canada Co-Products frGenome Canada Microbial Genomics for BiofuelsNatural Sciences and Engineering Research Council of Canada RGPIN-06173-2014
6 · The paper itself

Abstract

A metabolic, genomic and proteomic assessment of Fervidobacterium pennivorans strains was undertaken to clarify the metabolic and genetic capabilities of this Thermotogales species. The type strain Ven5 originally isolated from a hot mud spa in Italy, and a newly isolated strain (DYC) from a hot spring at Ngatamariki, New Zealand, were compared for metabolic and genomic differences. The fermentation profiles of both strains on cellobiose generated similar major end products (acetate, alanine, glutamate, H

Indexed as

FermentationGenome, BacterialGram-Negative Anaerobic Straight, Curved, and Helical RodsSubstrate SpecificitySugarsThermotoleranceSugarsFermentationMetabolismThermophilic

Identifiers

PMID30182148

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.