Evidence map›Paper›PMID 30180895›Full record

ArticleBMC biotechnology2018

Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification.

Guotian Li, Kyle C Jones, Aymerick Eudes, Venkataramana R Pidatala, Jian Sun, Feng Xu, Chengcheng Zhang, Tong Wei, Rashmi Jain, Devon Birdseye and 12 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 55 citations in OpenAlex.

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  10. Natural variation inFrontiers in plant science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Guotian LiJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Kyle C JonesJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Aymerick EudesJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Venkataramana R PidatalaJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Jian SunJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Feng XuJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Chengcheng ZhangDepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.
Tong WeiJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Rashmi JainJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Devon BirdseyeJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Patrick E CanlasDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.
Edward E K BaidooJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Phat Q DuongDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.
Manoj K SharmaJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Seema SinghJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Deling RuanJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Jay D KeaslingJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Jenny C MortimerJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Dominique LoquéJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Laura E BartleyDepartment of Microbiology and Plant Biology, University of Oklahoma, Norman, OK, 73019, USA.
Henrik V SchellerJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Pamela C RonaldJoint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. pcronald@ucdavis.edu.
Joint BioEnergy Institute · USLawrence Berkeley National Laboratory · USUniversity of California, Davis · USUniversity of Oklahoma · USJawaharlal Nehru University · INSandia National Laboratories California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSwitchgrass (Panicum virgatum L.) is a promising bioenergy feedstock because it can be grown on marginal land and produces abundant biomass. Recalcitrance of the lignocellulosic components of the switchgrass cell wall to enzymatic degradation into simple sugars impedes efficient biofuel production. We previously demonstrated that overexpression of OsAT10, a BAHD acyltransferase gene, enhances saccharification efficiency in rice.

resultsHere we show that overexpression of the rice OsAT10 gene in switchgrass decreased the levels of cell wall-bound ferulic acid (FA) in green leaf tissues and to a lesser extent in senesced tissues, and significantly increased levels of cell wall-bound p-coumaric acid (p-CA) in green leaves but decreased its level in senesced tissues of the T

conclusionOur study demonstrates that overexpression of OsAT10, a rice BAHD acyltransferase gene, enhances saccharification of lignocellulosic biomass in switchgrass.

Indexed as

AcyltransferasesBiomassCell WallGene Expression Regulation, PlantLigninOryzaPanicumPlant ProteinsPlants, Genetically ModifiedAcyltransferasesLigninlignocellulosePlant ProteinsAcyltransferaseBioenergyBiofuelFerulic acidOsAT10p-coumaric acidRecalcitranceSaccharificationSwitchgrass

Identifiers

PMID30180895
PMCPMC6123914
OpenAlexW2891204954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.