Evidence map›Paper›PMID 30179447›Full record

ArticleAnalytical chemistry2018

Glycan Isomer Identification Using Ultraviolet Photodissociation Initiated Radical Chemistry.

Dylan L Riggs, Johanna Hofmann, Heung S Hahm, Peter H Seeberger, Kevin Pagel, Ryan R Julian

Abstract read
In one paragraph

Article in Analytical chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. RDD-HCD Provides Variable Fragmentation Routes Dictated by Radical Stability.Journal of the American Society for Mass Spectrometry · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Linkage Memory in Underivatized Protonated Carbohydrates.Journal of the American Society for Mass Spectrometry · 2021
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Advancing Solutions to the Carbohydrate Sequencing Challenge.Journal of the American Chemical Society · 2019
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dylan L RiggsDepartment of Chemistry , University of California, Riverside , 501 Big Springs Road , Riverside , California 92521 , United States.
Johanna HofmannDepartment of Molecular Physics , Fritz Haber Institute of the Max Planck Society , Faradayweg 4-6 , 14195 Berlin , Germany.
Heung S HahmDepartment for Biomolecular Systems , Max Planck Institute of Colloids and Interfaces , Am Mühlenberg 1 , 14476 Potsdam , Germany.
Peter H SeebergerDepartment for Biomolecular Systems , Max Planck Institute of Colloids and Interfaces , Am Mühlenberg 1 , 14476 Potsdam , Germany.ORCID 0000-0003-3394-8466
Kevin PagelDepartment of Molecular Physics , Fritz Haber Institute of the Max Planck Society , Faradayweg 4-6 , 14195 Berlin , Germany.ORCID 0000-0001-8054-4718
Ryan R JulianDepartment of Chemistry , University of California, Riverside , 501 Big Springs Road , Riverside , California 92521 , United States.ORCID 0000-0003-1580-8355

Funding

Identification of peptide epimers in crystallin proteinsR01GM107099 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI JULIAN, RYAN ROY · 2014 to 2017
$1.1M
NIGMS NIH HHS R01 GM107099
6 · The paper itself

Abstract

Glycans are fundamental biological macromolecules, yet despite their prevalence and recognized importance, a number of unique challenges hinder routine characterization. The multiplicity of OH groups in glycan monomers easily afford branched structures and alternate linkage sites, which can result in isomeric structures that differ by minute details. Herein, radical chemistry is employed in conjunction with mass spectrometry to enable rapid, accurate, and high throughput identification of a challenging series of closely related glycan isomers. The results are compared with analysis by collision-induced dissociation, higher-energy collisional dissociation, and ultraviolet photodissociation (UVPD) at 213 nm. In general, collision-based activation struggles to produce characteristic fragmentation patterns, while UVPD and radical-directed dissociation (RDD) can distinguish all isomers. In the case of RDD, structural differentiation derives from radical mobility and subsequent fragmentation. For glycans, the energetic landscape for radical migration is flat, increasing the importance of the three-dimensional structure. RDD is therefore a powerful and straightforward method for characterizing glycan isomers.

Indexed as

Tandem Mass SpectrometryUltraviolet RaysChromatography, High Pressure LiquidIsomerismPhotolysisPolysaccharidesPolysaccharides

Identifiers

PMID30179447
PMCPMC11216535

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.