Evidence map›Paper›PMID 30179222›Full record

ArticleThe Journal of clinical investigation2018

Mutations in multiple components of the nuclear pore complex cause nephrotic syndrome.

Daniela A Braun, Svjetlana Lovric, David Schapiro, Ronen Schneider, Jonathan Marquez, Maria Asif, Muhammad Sajid Hussain, Ankana Daga, Eugen Widmeier, Jia Rao and 48 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 140 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Article
  6. Article
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  8. Article
  9. Article
  10. Review
  11. Article
  12. Nucleoporins cooperate with Polycomb silencers to promote transcriptional repression and repair at DNA double-strand breaks.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Article
  15. Review
  16. Nucleoporin-associated steroid-resistant nephrotic syndrome.Pediatric nephrology (Berlin, Germany) · 2025
    Review
  17. Article
  18. Article
  19. NovelClinical kidney journal · 2025
    Article
  20. Case Report: a novel variant inFrontiers in nephrology · 2025
    Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

58 authors at 18 institutions in 11 countries.

Daniela A BraunDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Svjetlana LovricDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
David SchapiroDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Ronen SchneiderDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jonathan MarquezPediatric Genomics Discovery Program, Department of Pediatrics and Genetics, Yale University School of Medicine, New Haven, Connecticut, USA.
Maria AsifCologne Center for Genomics, University of Cologne, Cologne, Germany.
Muhammad Sajid HussainCologne Center for Genomics, University of Cologne, Cologne, Germany.
Ankana DagaDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Eugen WidmeierDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jia RaoDepartment of Nephrology, Children's Hospital of Fudan University, Shanghai, China.
Shazia AshrafDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Weizhen TanDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
C Patrick LuskDepartment of Cell Biology, Yale University School of Medicine, New Haven, Connecticut, USA.
Amy KolbDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Tilman Jobst-SchwanDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Johanna Magdalena SchmidtDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Charlotte A HoogstratenDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Kaitlyn EddyDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Thomas M KitzlerDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Shirlee ShrilDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Abubakar MoawiaCologne Center for Genomics, University of Cologne, Cologne, Germany.
Kathrin SchrageInstitute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany.
Arwa Ishaq A KhayyatInstitute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany.
Jennifer A LawsonDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Heon Yung GeeDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jillian K WarejkoDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Tobias HermleDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Amar J MajmundarDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Hannah HugoDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Birgit BuddeCologne Center for Genomics, University of Cologne, Cologne, Germany.
Susanne MotamenyCologne Center for Genomics, University of Cologne, Cologne, Germany.
Janine AltmüllerCologne Center for Genomics, University of Cologne, Cologne, Germany.
Angelika Anna NoegelInstitute of Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany.
Hanan M FathyPediatric Nephrology Unit, Alexandria Faculty of Medicine, University of Alexandria, Alexandria, Egypt.
Daniel P GaleCentre for Nephrology, University College London, Royal Free Hospital, London, United Kingdom.
Syeda Seema WaseemCologne Center for Genomics, University of Cologne, Cologne, Germany.
Ayaz KhanHuman Molecular Genetics Laboratory, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan.
Larissa KerecukBirmingham Children's Hospital NHS Foundation Trust, Birmingham, United Kingdom.
Seema HashmiDepartment of Pediatric Nephrology, Sindh Institute of Urology and Transplantation, Karachi, Pakistan.
Nilufar MohebbiDivision of Nephrology, University Hospital Zurich, Zurich, Switzerland.
Robert EttengerDepartment of Pediatrics, University of California, Los Angeles, California.
Erkin SerdaroğluDepartment of Pediatric Nephrology, Dr. Behçet Uz Children's Hospital, Izmir, Turkey.
Khalid A AlhasanPediatric Department, College of Medicine, King Saud University and King Khalid University Hospital, Riyadh, Saudi Arabia.
Mais HashemDepartment of Genetics, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Sara GoncalvesLaboratory of Hereditary Kidney Diseases, INSERM UMR1163, Imagine, Institute, Paris, France.
Gema AricetaUniversitat Autonoma de Barcelona, Hospital Universitari Vall d'Hebron, Pediatric Nephrology, Barcelona, Spain.
Mercedes UbetagoyenaHospital Universitario Donostia, Pediatric Nephrology, Donostia-San Sebastian, Spain.
Wolfram AntoninInstitute of Biochemistry and Molecular Cell Biology, Medical School, RWTH Aachen University, 52074 Aachen, Germany.
Shahid Mahmood BaigHuman Molecular Genetics Laboratory, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Pakistan Institute of Engineering and Applied Sciences, Faisalabad, Pakistan.
Fowzan S AlkurayaDepartment of Genetics, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Qian ShenDepartment of Nephrology, Children's Hospital of Fudan University, Shanghai, China.
Hong XuDepartment of Nephrology, Children's Hospital of Fudan University, Shanghai, China.
Corinne AntignacLaboratory of Hereditary Kidney Diseases, INSERM UMR1163, Imagine, Institute, Paris, France.
Richard P LiftonDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut, USA.
Shrikant ManeDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut, USA.
Peter NürnbergCologne Center for Genomics, University of Cologne, Cologne, Germany.
Mustafa K KhokhaPediatric Genomics Discovery Program, Department of Pediatrics and Genetics, Yale University School of Medicine, New Haven, Connecticut, USA.
Friedhelm HildebrandtDepartment of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Boston Children's Hospital · USUniversity of Cologne · DENational Institute for Biotechnology and Genetic Engineering · PKYale University · USChildren's Hospital of Fudan University · CNDélégation Paris 5 · FRKing Abdulaziz City for Science and Technology · SAAlexandria University · EGBiogipuzkoa Health Research Institute · ESBirmingham Children's Hospital · GBDr. Behçet Uz Çocuk Hastalıkları Hastanesi · TRKing Saud University · SARWTH Aachen University · DESindh Institute of Urology and Transplantation · PKThe Royal Free Hospital · GBUniversitat Autònoma de Barcelona · ESUniversity Hospital of Zurich · CHUniversity of California, Los Angeles · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Renal Physiology and Phenotyping CoreP30DK079310 · NIDDK · YALE UNIVERSITY · PI ARONSON, PETER S. · 2008 to 2022
$16.8M
Yale Center for Mendelian DisordersU54HG006504 · NHGRI · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, GUNEL, MURAT · 2012 to 2015
$11.0M
RESEARCH TRAINING IN PEDIATRIC NEPHROLOGYT32DK007726 · NIDDK · CHILDREN'S HOSPITAL BOSTON · PI BRISCOE, DAVID M. · 1994 to 2023
$5.9M
New Mechanisms of Heterotaxy and Congenital Heart Disease: Nucleoporins at CiliaR01HL124402 · NHLBI · YALE UNIVERSITY · PI KHOKHA, MUSTAFA K, LUSK, CHARLES PATRICK · 2015 to 2022
$5.5M
Identification and function of new genes causing childhood nephrotic syndromeR01DK076683 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HILDEBRANDT, FRIEDHELM · 2007 to 2021
$5.3M
High Performance Computing Instrumentation for the Yale Center for Genome AnalysisS10OD030363 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2022 to 2022
$1.2M
High Performance Computing Instrumentation for the Yale Center for Genome AnalysiS10OD018521 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2015 to 2015
$890k
NHGRI NIH HHS U54 HG006504NHLBI NIH HHS R01 HL124402NIDDK NIH HHS P30 DK079310NIDDK NIH HHS R01 DK076683NIDDK NIH HHS T32 DK007726NIGMS NIH HHS T32 GM007205NIGMS NIH HHS T32 GM007223NIH HHS S10 OD018521NIH HHS S10 OD030363
6 · The paper itself

Abstract

Steroid-resistant nephrotic syndrome (SRNS) almost invariably progresses to end-stage renal disease. Although more than 50 monogenic causes of SRNS have been described, a large proportion of SRNS remains unexplained. Recently, it was discovered that mutations of NUP93 and NUP205, encoding 2 proteins of the inner ring subunit of the nuclear pore complex (NPC), cause SRNS. Here, we describe mutations in genes encoding 4 components of the outer rings of the NPC, namely NUP107, NUP85, NUP133, and NUP160, in 13 families with SRNS. Using coimmunoprecipitation experiments, we showed that certain pathogenic alleles weakened the interaction between neighboring NPC subunits. We demonstrated that morpholino knockdown of nup107, nup85, or nup133 in Xenopus disrupted glomerulogenesis. Re-expression of WT mRNA, but not of mRNA reflecting mutations from SRNS patients, mitigated this phenotype. We furthermore found that CRISPR/Cas9 knockout of NUP107, NUP85, or NUP133 in podocytes activated Cdc42, an important effector of SRNS pathogenesis. CRISPR/Cas9 knockout of nup107 or nup85 in zebrafish caused developmental anomalies and early lethality. In contrast, an in-frame mutation of nup107 did not affect survival, thus mimicking the allelic effects seen in humans. In conclusion, we discovered here that mutations in 4 genes encoding components of the outer ring subunits of the NPC cause SRNS and thereby provide further evidence that specific hypomorphic mutations in these essential genes cause a distinct, organ-specific phenotype.

Indexed as

AnimalsCell LineDisease Models, AnimalGene Knockdown TechniquesHumansNephrotic SyndromeNuclear Pore Complex ProteinsXenopus laevisXenopus ProteinsZebrafishZebrafish ProteinsNuclear Pore Complex ProteinsXenopus ProteinsZebrafish ProteinsGeneticsMonogenic diseasesNephrology

Identifiers

PMID30179222
PMCPMC6159964
OpenAlexW2891921574

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.