Evidence map›Paper›PMID 30178745›Full record

ArticleeLife2018

The mobility of packaged phage genome controls ejection dynamics.

Alex Evilevitch

Abstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Viral Genome Delivery Across Bacterial Cell Surfaces.Annual review of microbiology · 2024
    Review
  2. Review
  3. Temperature-induced DNA density transition in phage λ capsid revealed with contrast-matching SANS.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
  6. Mechanical Constraint Effect on DNA Persistence Length.Molecules (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Review
  9. Predicting the capsid architecture of phages from metagenomic data.Computational and structural biotechnology journal · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Frontiers in microbiology · 2020
    Article
  14. Article
  15. Time-resolved DNA release from an O-antigen-specificThe Journal of biological chemistry · 2019
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Alex EvilevitchDepartment of Pathobiology, Division of Microbiology and Immunology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Champaign, United States.ORCID https://orcid.org/0000-0002-0245-9574

Funding

National Science Foundation 1507694Vetenskapsrådet 34920143962Vetenskapsrådet 62120145537
6 · The paper itself

Abstract

The cell decision between lytic and lysogenic infection is strongly influenced by dynamics of DNA injection into a cell from a phage population, as phages compete for limited resources and progeny. However, what controls the timing of viral DNA ejection events was not understood. This in vitro study reveals that DNA ejection dynamics for phages can be synchronized (occurring within seconds) or desynchronized (displaying minutes-long delays in initiation) based on mobility of encapsidated DNA, which in turn is regulated by environmental factors, such as temperature and extra-cellular ionic conditions. This mechano-regulation of ejection dynamics is suggested to influence viral replication where the cell's decision between lytic and latent infection is associated with synchronized or desynchronized delayed ejection events from phage population adsorbed to a cell. Our findings are of significant importance for understanding regulatory mechanisms of latency in phage and Herpesviruses, where encapsidated DNA undergoes a similar mechanical transition.

Indexed as

Genome, ViralMovementBacteriophage lambdaCalorimetryCapsidDNA, ViralIonsLightMagnesiumScattering, RadiationScattering, Small AngleTemperatureVirus AssemblyX-Ray DiffractionDNA, ViralIonsMagnesiumcalorimetryDNA ejection dynamicsDNA pressureDNA transitioninfectious diseaselatent and lytic infectionmicrobiologymolecular biophysicsphagestructural biologyvirus

Identifiers

PMID30178745
PMCPMC6122950

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.