Evidence map›Paper›PMID 30178502›Full record

ArticleHuman mutation2018

Insights into the genotype-phenotype correlation and molecular function of SLC25A46.

Alexander J Abrams, Flavia Fontanesi, Natalie B L Tan, Elena Buglo, Ion J Campeanu, Adriana P Rebelo, Andrew J Kornberg, Dean G Phelan, Zornitza Stark, Stephan Zuchner

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Human mutation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Molecular machineries shaping the mitochondrial inner membrane.Nature reviews. Molecular cell biology · 2025
    Review
  2. Review
  3. A novel homozygous variant inFrontiers in pediatrics · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Case report: A novel variant inFrontiers in neurology · 2022
    Article
  9. Review
  10. Mitochondrial Retinopathies.International journal of molecular sciences · 2021
    Review
  11. Reanalysis of Exome Data Identifies NovelJournal of personalized medicine · 2021
    Article
  12. Article
  13. Review
  14. Epigenetic Regulation of ALS and CMT: A Lesson fromInternational journal of molecular sciences · 2021
    Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Mitochondrial diseases: expanding the diagnosis in the era of genetic testing.Journal of translational genetics and genomics · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Alexander J AbramsJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami, Miami, Florida, USA.ORCID 0000-0001-7543-6464
Flavia FontanesiDepartment of Biochemistry and Molecular Biology, University of Miami, Miami, Florida, USA.
Natalie B L TanVictorian Clinical Genetics Services, Murdoch Childrens Research Institute, Melbourne, Australia.
Elena BugloJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami, Miami, Florida, USA.
Ion J CampeanuWayne State University School of Medicine, Detroit, Michigan, USA.
Adriana P RebeloJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami, Miami, Florida, USA.
Andrew J KornbergDepartment of Neurology, Royal Children's Hospital, Melbourne, Victoria, Australia.
Dean G PhelanVictorian Clinical Genetics Services, Murdoch Childrens Research Institute, Melbourne, Australia.
Zornitza StarkVictorian Clinical Genetics Services, Murdoch Childrens Research Institute, Melbourne, Australia.
Stephan ZuchnerJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami, Miami, Florida, USA.
University of Miami · USVictorian Clinical Genetics Services · AURoyal Children's Hospital · AUWayne State University · US

Funding

trainingU54NS065712 · NINDS · WAYNE STATE UNIVERSITY · PI SHY, MICHAEL E. · 2009 to 2023
$19.6M
GENOME STUDIES IN HEREDITARY SPASTIC PARAPLEGIA - beyond the exomeR01NS072248 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Stephan Zuchner · 2011 to 2026
$9.2M
Genomic Studies in Charcot-Marie-Tooth DiseaseR01NS075764 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SHY, MICHAEL E., ZUCHNER, STEPHAN · 2012 to 2016
$3.0M
NINDS NIH HHS R01 NS072248NINDS NIH HHS R01 NS075764NINDS NIH HHS U54 NS065712
6 · The paper itself

Abstract

Recessive SLC25A46 mutations cause a spectrum of neurodegenerative disorders with optic atrophy as a core feature. We report a patient with optic atrophy, peripheral neuropathy, ataxia, but not cerebellar atrophy, who is on the mildest end of the phenotypic spectrum. By studying seven different nontruncating mutations, we found that the stability of the SLC25A46 protein inversely correlates with the severity of the disease and the patient's variant does not markedly destabilize the protein. SLC25A46 belongs to the mitochondrial transporter family, but it is not known to have transport function. Apart from this possible function, SLC25A46 forms molecular complexes with proteins involved in mitochondrial dynamics and cristae remodeling. We demonstrate that the patient's mutation directly affects the SLC25A46 interaction with MIC60. Furthermore, we mapped all of the reported substitutions in the protein onto a 3D model and found that half of them fall outside of the signature carrier motifs associated with transport function. We thus suggest that there are two distinct molecular mechanisms in SLC25A46-associated pathogenesis, one that destabilizes the protein while the other alters the molecular interactions of the protein. These results have the potential to inform clinical prognosis of such patients and indicate a pathway to drug target development.

Indexed as

Polymorphism, Single NucleotideAtaxiaChildGenetic Association StudiesHumansMaleMitochondrial DynamicsMitochondrial ProteinsModels, MolecularOptic AtrophyPedigreePeripheral Nervous System DiseasesPhosphate Transport ProteinsProtein BindingProtein ConformationMitochondrial ProteinsPhosphate Transport ProteinsSLC25A46 protein, humanAtaxiaMitochondriaOptic atrophySLC25A46

Identifiers

PMID30178502
PMCPMC6240357
OpenAlexW2889978695

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.