Evidence map›Paper›PMID 30175754›Full record

ArticleThe Journal of veterinary medical science2018

Identification of reference genes for quantitative PCR analyses in developing mouse gonads.

Toshifumi Yokoyama, Takuya Omotehara, Tetsushi Hirano, Naoto Kubota, Shogo Yanai, Chinatsu Hasegawa, Tadashi Takada, Yohei Mantani, Nobuhiko Hoshi

Abstract read
In one paragraph

Article in The Journal of veterinary medical science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  13. International journal of medical sciences · 2020
    Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Toshifumi YokoyamaDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Takuya OmoteharaDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Tetsushi HiranoDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Naoto KubotaDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Shogo YanaiDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Chinatsu HasegawaDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Tadashi TakadaDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Yohei MantaniDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.
Nobuhiko HoshiDepartment of Animal Science, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stable reference genes are important for gene expression analyses such as quantitative PCR. The stability of 15 candidate reference genes that can be used to developing mouse gonads was thoroughly verified using combinations of multiple algorithms. The expression of these genes fluctuated greatly depending on the analysis period and/or gender. Peptidylprolyl isomerase A (Ppia) and polymerase (RNA) II (DNA directed) polypeptide A (Polr2a) were the reference genes that were used stably for a wide analysis period in developing mouse gonads. Furthermore, the stable reference genes corresponding to the analysis period and/or gender were ranked. These results are useful for the selection of the optimal reference gene required for high-precision measurements.

Indexed as

Genes, DevelopmentalReal-Time Polymerase Chain ReactionAlgorithmsAnimalsFemaleGenes, ReporterGonadsMaleMiceMice, Inbred C57BLReference Standardsdeveloping mouse gonadgene expressionnormalizationquantitative PCRreference gene

Identifiers

PMID30175754
PMCPMC6207531

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.