Evidence map›Paper›PMID 30175265›Full record

ArticleHeliyon2018

Clinico-epidemiological investigation on Varicella Zoster Virus indicates multiple clade circulation in Maharashtra state, India.

Rima R Sahay, Pragya D Yadav, Triparna Majumdar, Swapnil Patil, Prasad Sarkale, Anita M Shete, Gouri Chaubal, Vinay R Dange, Savita Patil, Dimpal A Nyayanit and 2 more

Abstract read
In one paragraph

Article in Heliyon, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Rima R SahayMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Pragya D YadavMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Triparna MajumdarMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Swapnil PatilMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Prasad SarkaleMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Anita M SheteMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Gouri ChaubalMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Vinay R DangeKasturba Infectious Disease Hospital, Saat Rasta, Arthur Road, Chinchpokli, Mumbai 400011, India.
Savita PatilMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Dimpal A NyayanitMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.
Jayanthi ShastriKasturba Infectious Disease Hospital, Saat Rasta, Arthur Road, Chinchpokli, Mumbai 400011, India.
Devendra T MouryaMicrobial Containment Complex, ICMR- National Institute of Virology, Sus Road, Pashan, Pune 410021, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundVaricella Zoster Virus (VZV) is consistently in circulation and shows an increase in disease burden during the spring season. Due to a wide range of clinical presentation from a vesicular rash to bleeding or neurological complications, it makes the clinical diagnosis difficult. The present study aims to understand whether the same strain of virus is responsible for the increase in the seasonal outbreaks occurring in different parts of the country with reference to the samples from Maharashtra, Rajasthan and Gujarat states of India. MATERIALS AND

methodsThis study reports the clinico-epidemiological and laboratory findings of suspected Varicella cases. To understand the circulating clade few representative real-time Polymerase Chain Reaction (PCR) positive were analyzed by conventional PCR and partial Open Reading Frame (ORF) 22, partial ORF 38 and partial ORF 54 were sequenced to identify single nucleotide polymorphisms responsible for clade determination. Further partial glycoprotein B gene was sequenced, and a phylogenetic tree was generated.

resultsA total of 50 cases from Maharashtra (Mumbai district) and referred clinical samples of Rajasthan (Barmer district; n = 12) and Gujarat States (Gandhi Nagar, Surat districts; n = 17) were tested for the presence of VZV. Vesicular rash with fever was a common clinical presentation with 82% cases having contact history with VZV positive cases, suggesting higher secondary attack rate. The vesicular fluid of all 50 cases from Mumbai revealed the presence of VZV by real-time PCR. Urine, serum and throat swab samples showed positivity by real-time PCR. Healthcare provider's samples from Rajasthan showed 36.4% [4/11] positivity. Clinical samples from Gujarat had positivity of 41.2% [7/17].

conclusionsThis study analyses the clade based circulation of VZV in three states in India and suggests different clades circulating in Maharashtra state. Health education amongst the general population is suggested to reduce the secondary cases by early diagnosis, effective isolation policies and vaccination to reduce the burden of disease.

Indexed as

EpidemiologyInfectious diseasePublic healthvirology

Identifiers

PMID30175265
PMCPMC6118100

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.