Evidence map›Paper›PMID 30173660›Full record

ArticleGenome biology2018

Decreasing miRNA sequencing bias using a single adapter and circularization approach.

Sergio Barberán-Soler, Jenny M Vo, Ryan E Hogans, Anne Dallas, Brian H Johnston, Sergei A Kazakov

Abstract read
In one paragraph

Article in Genome biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

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  10. Circulating miRNAs are associated with successful bone regeneration.Frontiers in bioengineering and biotechnology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sergio Barberán-SolerSomaGenics, Inc., Santa Cruz, California, USA. sbarberan@somagenics.com.ORCID 0000-0002-5243-6813
Jenny M VoSomaGenics, Inc., Santa Cruz, California, USA.
Ryan E HogansSomaGenics, Inc., Santa Cruz, California, USA.
Anne DallasSomaGenics, Inc., Santa Cruz, California, USA.
Brian H JohnstonSomaGenics, Inc., Santa Cruz, California, USA.
Sergei A KazakovSomaGenics, Inc., Santa Cruz, California, USA. skazakov@somagenics.com.

Funding

A method for preparing unbiased miRNA sequencing libraries (miR-ACS)R44HG007788 · NHGRI · SOMAGENICS, INC. · PI KAZAKOV, SERGEI A · 2016 to 2017
$1.8M
A method for preparing unbiased miRNA sequencing librariesR43HG007788 · NHGRI · SOMAGENICS, INC. · PI KAZAKOV, SERGEI A · 2014 to 2014
$269k
National Human Genome Research Institute (US) R44HG007788NHGRI NIH HHS R43 HG007788NHGRI NIH HHS R43HG007788NHGRI NIH HHS R44 HG007788
6 · The paper itself

Abstract

The ability to accurately quantify all the microRNAs (miRNAs) in a sample is important for understanding miRNA biology and for development of new biomarkers and therapeutic targets. We develop a new method for preparing miRNA sequencing libraries, RealSeq®-AC, that involves ligating the miRNAs with a single adapter and circularizing the ligation products. When compared to other methods, RealSeq®-AC provides greatly reduced miRNA sequencing bias and allows the identification of the largest variety of miRNAs in biological samples. This reduced bias also allows robust quantification of miRNAs present in samples across a wide range of RNA input levels.

Indexed as

BiasBrain ChemistryHumansMicroRNAsSequence Analysis, RNAMicroRNAsmiRNA-seqSequencing biasSmall RNA library preparationSmall RNA sequencing

Identifiers

PMID30173660
PMCPMC6120088

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.