Evidence map›Paper›PMID 30171048›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2018

Rare but Recurrent ROS1 Fusions Resulting From Chromosome 6q22 Microdeletions are Targetable Oncogenes in Glioma.

Monika A Davare, Jacob J Henderson, Anupriya Agarwal, Jacob P Wagner, Sudarshan R Iyer, Nameeta Shah, Randy Woltjer, Romel Somwar, Stephen W Gilheeney, Ana DeCarvalo and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
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  18. GOPC-ROS1 mosaicism in agminated Spitz naevi: report of two cases.Virchows Archiv : an international journal of pathology · 2021
    Article
  19. Review
  20. Correlating ROS1 Protein Expression WithJTO clinical and research reports · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Monika A DavareDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Pediatric Research Institute, Oregon Health and Sciences University, Portland, Oregon. davarem@ohsu.edu.
Jacob J HendersonDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Pediatric Research Institute, Oregon Health and Sciences University, Portland, Oregon.ORCID 0000-0002-3465-2256
Anupriya AgarwalKnight Cancer Institute, Oregon Health and Sciences University, Portland, Oregon.
Jacob P WagnerKnight Cancer Institute, Oregon Health and Sciences University, Portland, Oregon.
Sudarshan R IyerDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Pediatric Research Institute, Oregon Health and Sciences University, Portland, Oregon.
Nameeta ShahThe Ben and Catherine Ivy Center for Advanced Brain Tumor Treatment, Swedish Neuroscience Institute, Seattle Washington.ORCID 0000-0002-4429-8414
Randy WoltjerDepartment of Pathology, Oregon Health and Sciences University, Portland, Oregon.
Romel SomwarDepartment of Pathology, Human Oncology & Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Stephen W GilheeneyDepartments of Neurology and Neurosurgery, Henry Ford Hospital, Detroit, Michigan.
Ana DeCarvaloDepartment of Pediatrics, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0003-1183-4548
Tom MikkelsonDepartment of Pediatrics, Memorial Sloan Kettering Cancer Center, New York, New York.
Erwin G Van MeirDepartments of Neurosurgery and Hematology & Medical Oncology, School of Medicine and Winship Cancer Institute Emory University, Atlanta, Georgia.ORCID 0000-0003-2444-7707
Marc LadanyiDepartment of Pathology, Human Oncology & Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Brian J DrukerKnight Cancer Institute, Oregon Health and Sciences University, Portland, Oregon.
Oregon Health & Science University · USMemorial Sloan Kettering Cancer Center · USEmory University · USHenry Ford Hospital · USHoward Hughes Medical Institute · USSwedish Medical Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Understanding the origins of rapid recurrence of pancreatic cancer after resectionP30CA069533 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Luiz Eduardo Bertassoni · 1997 to 2026
$60.5M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA008748NCI NIH HHS P30 CA069533
6 · The paper itself

Abstract

purposeGliomas, a genetically heterogeneous group of primary central nervous system tumors, continue to pose a significant clinical challenge. Discovery of chromosomal rearrangements involving kinase genes has enabled precision therapy, and improved outcomes in several malignancies. EXPERIMENTAL

designPositing that similar benefit could be accomplished for patients with brain cancer, we evaluated The Cancer Genome Atlas (TCGA) glioblastoma dataset. Functional validation of the oncogenic potential and inhibitory sensitivity of discovered ROS1 fusions was performed using three independent cell-based model systems, and an

results

conclusionsOur findings highlight that CNS tumors should be specifically interrogated for these rare intrachromosomal 6q22 microdeletion events that generate actionable ROS1 fusions. ROS1 fusions in primary brain cancer may be amenable for clinical intervention with kinase inhibitors, and this holds the potential of novel treatment paradigms in these treatment-refractory cancer types, particularly in glioblastoma.

Indexed as

Chromosome DeletionChromosomes, Human, Pair 6AnimalsAntineoplastic AgentsBiomarkers, TumorCell Line, TumorDisease Models, AnimalGene Expression Regulation, NeoplasticGliomaHumansMiceMolecular Targeted TherapyOncogene Proteins, FusionProtein Kinase InhibitorsProtein-Tyrosine KinasesProto-Oncogene ProteinsAntineoplastic AgentsBiomarkers, TumorOncogene Proteins, FusionProtein Kinase InhibitorsProtein-Tyrosine KinasesProto-Oncogene ProteinsROS1 protein, human

Identifiers

PMID30171048
PMCPMC6295214
OpenAlexW2889101235

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.