Evidence map›Paper›PMID 30170115›Full record

ArticleGastroenterology2018

Rapid Disruption of Genes Specifically in Livers of Mice Using Multiplex CRISPR/Cas9 Editing.

Francis P Pankowicz, Mercedes Barzi, Kang Ho Kim, Xavier Legras, Celeste Santos Martins, Clavia Ruth Wooton-Kee, William R Lagor, Juan C Marini, Sarah H Elsea, Beatrice Bissig-Choisat and 2 more

Abstract read
In one paragraph

Article in Gastroenterology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Genome Editing with AAV-BR1-CRISPR in Postnatal Mouse Brain Endothelial Cells.International journal of biological sciences · 2022
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Genome editing technologies to treat rare liver diseases.Translational gastroenterology and hepatology · 2020
    Review
  14. Using CRISPR/Cas9 to model human liver disease.JHEP reports : innovation in hepatology · 2019
    Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Francis P PankowiczCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
Mercedes BarziCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
Kang Ho KimDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
Xavier LegrasCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
Celeste Santos MartinsCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
Clavia Ruth Wooton-KeeDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
William R LagorCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, Texas.
Juan C MariniDepartment of Pediatrics, Baylor College of Medicine, Houston, Texas.
Sarah H ElseaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Beatrice Bissig-ChoisatCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas.
David D MooreDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas; Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, Texas.
Karl-Dimiter BissigCenter for Cell and Gene Therapy, Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas; Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, Texas. Electronic address: bissig@bcm.edu.
Baylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
Genetic Repair of Familial HypercholesterolemiaR01HL132840 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LAGOR, WILLIAM RAYMOND · 2017 to 2025
$5.4M
Therapeutic potential of CRISPR/Cas9 genome engineering in humanized mouse modelsR01HL134510 · NHLBI · DUKE UNIVERSITY · PI BISSIG, KARL-DIMITER · 2016 to 2020
$3.0M
Therapeutic pathway reprogramming for metabolic liver diseaseR01DK115461 · NIDDK · DUKE UNIVERSITY · PI BISSIG, KARL-DIMITER · 2018 to 2020
$1.1M
Therapeutic pathway reprogramming for metabolic liver diseaseR56DK115461 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI BISSIG, KARL-DIMITER · 2017 to 2017
$238k
NCI NIH HHS P30 CA125123NHLBI NIH HHS R01 HL132840NHLBI NIH HHS R01 HL134510NHLBI NIH HHS T32 HL092332NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK115461NIDDK NIH HHS R56 DK115461
6 · The paper itself

Abstract

BACKGROUND &

aimsDespite advances in gene editing technologies, generation of tissue-specific knockout mice is time-consuming. We used CRISPR/Cas9-mediated genome editing to disrupt genes in livers of adult mice in just a few months, which we refer to as somatic liver knockouts.

methodsIn this system, Fah

resultsWe used this system to create mice with liver-specific knockout of argininosuccinate lyase, which develop hyperammonemia, observed in humans with mutations in this gene. We also created mice with liver-specific knockout of ATP binding cassette subfamily B member 11, which encodes the bile salt export pump. We found that these mice have a biochemical phenotype similar to that of Abcb11

conclusionsThis approach might be used to develop new models of liver diseases and study liver functions of genes that are required during development.

Indexed as

AnimalsArgininosuccinate LyaseATP Binding Cassette Transporter, Subfamily B, Member 11CRISPR-Associated Protein 9CRISPR-Cas SystemsDisease Models, AnimalGene EditingHepatocytesLiverMiceMice, KnockoutOxidoreductasesPhenotypePlasmidsArgininosuccinate LyaseATP Binding Cassette Transporter, Subfamily B, Member 11CRISPR-Associated Protein 9Hpd protein, mouseOxidoreductasesCRISPR/Cas9Liver Gene KnockoutMouse ModelsSLiK

Identifiers

PMID30170115
PMCPMC6420307
OpenAlexW2888864214

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.