Evidence map›Paper›PMID 30169882›Full record

ArticlePlant & cell physiology2019

Agrobacterium tumefaciens Enhances Biosynthesis of Two Distinct Auxins in the Formation of Crown Galls.

Kiyoshi Mashiguchi, Hiroshi Hisano, Noriko Takeda-Kamiya, Yumiko Takebayashi, Tohru Ariizumi, Yangbin Gao, Hiroshi Ezura, Kazuhiro Sato, Yunde Zhao, Ken-Ichiro Hayashi and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Microbial drivers of root plasticity.The New phytologist · 2025
    Review
  7. Article
  8. Article
  9. Engineering Agrobacterium for improved plant transformation.The Plant journal : for cell and molecular biology · 2025
    Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Inactivation of tomatoFrontiers in plant science · 2023
    Article
  15. Article
  16. Article
  17. Plant susceptible responses: the underestimated side of plant-pathogen interactions.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  18. Article
  19. Auxin Plays Multiple Roles during Plant-Pathogen Interactions.Cold Spring Harbor perspectives in biology · 2021
    Review
  20. Molecular and Histologic Adaptation of Horned Gall Induced by the AphidInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Kiyoshi MashiguchiGraduate School of Life Sciences, Tohoku University, Katahira, Aoba-ku, Sendai, Japan.
Hiroshi HisanoInstitute of Plant Science and Resources, Okayama University, 2-20-1 Chuo, Kurashiki, Okayama, Japan.
Noriko Takeda-KamiyaRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan.
Yumiko TakebayashiRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan.
Tohru AriizumiFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Yangbin GaoSection of Cell and Developmental Biology, University of California San Diego, La Jolla, CA, USA.
Hiroshi EzuraFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Kazuhiro SatoInstitute of Plant Science and Resources, Okayama University, 2-20-1 Chuo, Kurashiki, Okayama, Japan.
Yunde ZhaoSection of Cell and Developmental Biology, University of California San Diego, La Jolla, CA, USA.
Ken-Ichiro HayashiDepartment of Biochemistry, Okayama University of Science, Okayama, Japan.
Hiroyuki KasaharaRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, Japan.
RIKEN Center for Sustainable Resource Science · JPOkayama University · JPUniversity of California, San Diego · USUniversity of Tsukuba · JPOkayama University of Science · JPTohoku University · JP

Funding

Molecular mechanisms of auxin-mediated plant developmentR01GM114660 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZHAO, YUNDE · 2015 to 2018
$1.2M
NIGMS NIH HHS R01 GM114660
6 · The paper itself

Abstract

The plant pathogen Agrobacterium tumefaciens infects plants and introduces the transferred-DNA (T-DNA) region of the Ti-plasmid into nuclear DNA of host plants to induce the formation of tumors (crown galls). The T-DNA region carries iaaM and iaaH genes for synthesis of the plant hormone auxin, indole-3-acetic acid (IAA). It has been demonstrated that the iaaM gene encodes a tryptophan 2-monooxygenase which catalyzes the conversion of tryptophan to indole-3-acetamide (IAM), and the iaaH gene encodes an amidase for subsequent conversion of IAM to IAA. In this article, we demonstrate that A. tumefaciens enhances the production of both IAA and phenylacetic acid (PAA), another auxin which does not show polar transport characteristics, in the formation of crown galls. Using liquid chromatography-tandem mass spectroscopy, we found that the endogenous levels of phenylacetamide (PAM) and PAA metabolites, as well as IAM and IAA metabolites, are remarkably increased in crown galls formed on the stem of tomato plants, implying that two distinct auxins are simultaneously synthesized via the IaaM-IaaH pathway. Moreover, we found that the induction of the iaaM gene dramatically elevated the levels of PAM, PAA and its metabolites, along with IAM, IAA and its metabolites, in Arabidopsis and barley. From these results, we conclude that A. tumefaciens enhances biosynthesis of two distinct auxins in the formation of crown galls.

Indexed as

Biosynthetic PathwaysAgrobacterium tumefaciensArabidopsisGene Expression Regulation, PlantHordeumIndoleacetic AcidsMetabolomePhenylacetatesPlant ProteinsPlants, Genetically ModifiedPlant TumorsReceptors, Cell SurfaceSolanum lycopersicumauxin receptor, plantIndoleacetic AcidsPhenylacetatesphenylacetic acidPlant ProteinsReceptors, Cell Surface

Identifiers

PMID30169882
PMCPMC6343636
OpenAlexW2889484641

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.