Evidence map›Paper›PMID 30169712›Full record

ArticleThe Journal of nutrition2018

Early-Life Neuronal-Specific Iron Deficiency Alters the Adult Mouse Hippocampal Transcriptome.

Amanda Barks, Stephanie J B Fretham, Michael K Georgieff, Phu V Tran

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of nutrition, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 58 citations in OpenAlex.

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  10. Can Iron Play a Crucial Role in Maintaining Cardiovascular Health in the 21st Century?International journal of environmental research and public health · 2022
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Amanda BarksDepartment of Pediatrics, University of Minnesota, Minneapolis, MN.
Stephanie J B FrethamDepartment of Biology, Luther College, Decorah, IA.
Michael K GeorgieffDepartment of Pediatrics, University of Minnesota, Minneapolis, MN.
Phu V TranDepartment of Pediatrics, University of Minnesota, Minneapolis, MN.
University of Minnesota · USLuther College · US

Funding

NEWBORN IRON DEFICIENCYR01HD029421 · NICHD · UNIVERSITY OF MINNESOTA TWIN CITIES · PI GEORGIEFF, MICHAEL K. · 2000 to 2015
$4.4M
Newborn Iron DeficiencyR01HD094809 · NICHD · UNIVERSITY OF MINNESOTA · PI Michael K. Georgieff · 2018 to 2026
$3.6M
Roles of Iron-Dependent PHD and JARID in Early-Life Iron Deficiency-Induced Adult Neural Gene DysregulationR01NS099178 · NINDS · UNIVERSITY OF MINNESOTA · PI TRAN, PHU V. · 2017 to 2021
$1.6M
A Genetic Model of Perinatal Hippocampal Iron DeficiencyR21HD054490 · NICHD · UNIVERSITY OF MINNESOTA · PI GEORGIEFF, MICHAEL K. · 2007 to 2009
$424k
The effect of developmental iron deficiency on TET proteins and DNA hydroxymethylationF30HD093285 · NICHD · UNIVERSITY OF MINNESOTA · PI BARKS, AMANDA KATHRYN · 2017 to 2020
$164k
NICHD NIH HHS F30 HD093285NICHD NIH HHS R01 HD029421NICHD NIH HHS R01 HD094809NICHD NIH HHS R21 HD054490NINDS NIH HHS R01 NS099178
6 · The paper itself

Abstract

Background: Iron deficiency (ID) compromises the developing nervous system, including the hippocampus, resulting in later-life deficits despite iron repletion. The iron-dependent molecular changes driving these lasting deficits, and the effect of early iron repletion, are incompletely understood. Previous studies have utilized dietary models of maternal-fetal ID anemia (IDA) to address these questions; however, concurrent anemia prevents delineation of the specific role of iron. Objective: The aim of the study was to isolate the effects of developmental ID on adult hippocampal gene expression and to determine if iron repletion reverses these effects in a mouse model of nonanemic hippocampal neuronal ID. Methods: Nonanemic, hippocampus-specific neuronal ID was generated by using a Tet-OFF dominant negative transferrin receptor (DN-TFR1) mouse model that impairs cellular iron uptake. Hippocampal ID was reversed with doxycycline at postnatal day 21 (P21) in a subset of mice to create 2 experimental groups, chronically iron-deficient and formerly iron-deficient mice, which were compared with their respective doxycycline-treated and untreated iron-sufficient controls. RNA from adult male hippocampi was sequenced. Paired-end reads were analyzed for differential expression. Differentially expressed genes were analyzed in Ingenuity Pathway Analysis. Results: A total of 346 genes were differentially expressed in adult, chronically iron-deficient hippocampi compared with controls. ID dysregulated genes in critical neurodevelopmental pathways, including axonal guidance, CDK5, Ephrin receptor, Rac, and Neurotrophin/Trk signaling. Iron repletion at P21 normalized adult hippocampal expression of 198 genes; however, genes involved in cAMP response element-binding protein (CREB) signaling, neurocognition, and neurologic disease remained dysregulated in adulthood. Conclusions: Chronic ID during development, independent of anemia, alters the adult mouse hippocampal transcriptome. Restoring iron status during a known critical period of hippocampal neurodevelopment incompletely normalized these changes, suggesting a need for additional studies to identify the most effective timeline for iron therapy, and adjunctive treatments that can fully restore ID-induced molecular changes, particularly in human populations in whom chronic ID is endemic.

Indexed as

Iron DeficienciesTranscriptomeAnemia, Iron-DeficiencyAnimalsAnimals, NewbornDisease Models, AnimalHippocampusIronMaleMiceMice, TransgenicNervous SystemNeurogenesisNeuronsNutritional StatusReceptors, TransferrinIronReceptors, TransferrinRNA

Identifiers

PMID30169712
PMCPMC6258792
OpenAlexW2888943365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.