Evidence map›Paper›PMID 30169705›Full record

ArticleMolecular biology and evolution2018

Integrating Embryonic Development and Evolutionary History to Characterize Tentacle-Specific Cell Types in a Ctenophore.

Leslie S Babonis, Melissa B DeBiasse, Warren R Francis, Lynne M Christianson, Anthony G Moss, Steven H D Haddock, Mark Q Martindale, Joseph F Ryan

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology and evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
7.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Rapid speciation in the holopelagic ctenophorebioRxiv : the preprint server for biology · 2024
    Article
  8. Morphological and dietary changes encoded in the genome ofNAR genomics and bioinformatics · 2024
    Article
  9. Article
  10. Article
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  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. A novel regulatory gene promotes novel cell fate by suppressing ancestral fate in the sea anemoneProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Studying Ctenophora WBR Using Mnemiopsis leidyi.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Leslie S BabonisWhitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL.
Melissa B DeBiasseWhitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL.
Warren R FrancisMonterey Bay Aquarium Research Institute (MBARI), Moss Landing, CA.
Lynne M ChristiansonMonterey Bay Aquarium Research Institute (MBARI), Moss Landing, CA.
Anthony G MossDepartment of Biological Sciences, Auburn University, Auburn, AL.
Steven H D HaddockMonterey Bay Aquarium Research Institute (MBARI), Moss Landing, CA.
Mark Q MartindaleWhitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL.
Joseph F RyanWhitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL.
Monterey Bay Aquarium Research Institute · USUniversity of Florida · USWhitney Museum of American Art · USAuburn University · US

Funding

Genetically encoded luminescence for in vivo imagingR01GM087198 · NIGMS · MONTEREY BAY AQUARIUM RESEARCH INST · PI HADDOCK, STEVEN · 2009 to 2012
$1.4M
NASA NNX14AB70GNIGMS NIH HHS 5-R01-GM087198NIGMS NIH HHS R01 GM087198
6 · The paper itself

Abstract

The origin of novel traits can promote expansion into new niches and drive speciation. Ctenophores (comb jellies) are unified by their possession of a novel cell type: the colloblast, an adhesive cell found only in the tentacles. Although colloblast-laden tentacles are fundamental for prey capture among ctenophores, some species have tentacles lacking colloblasts and others have lost their tentacles completely. We used transcriptomes from 36 ctenophore species to identify gene losses that occurred specifically in lineages lacking colloblasts and tentacles. We cross-referenced these colloblast- and tentacle-specific candidate genes with temporal RNA-Seq during embryogenesis in Mnemiopsis leidyi and found that both sets of candidates are preferentially expressed during tentacle morphogenesis. We also demonstrate significant upregulation of candidates from both data sets in the tentacle bulb of adults. Both sets of candidates were enriched for an N-terminal signal peptide and protein domains associated with secretion; among tentacle candidates we also identified orthologs of cnidarian toxin proteins, presenting tantalizing evidence that ctenophore tentacles may secrete toxins along with their adhesive. Finally, using cell lineage tracing, we demonstrate that colloblasts and neurons share a common progenitor, suggesting the evolution of colloblasts involved co-option of a neurosecretory gene regulatory network. Together these data offer an initial glimpse into the genetic architecture underlying ctenophore cell-type diversity.

Indexed as

Biological EvolutionAnimalsCtenophoraMarine ToxinsNeuronsMarine Toxins

Identifiers

PMID30169705
PMCPMC6278862
OpenAlexW2888835175

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.