Evidence map›Paper›PMID 30168091›Full record

ArticleGenes & genomics2018

Genome-wide analysis of Hanwoo and Chikso populations using the BovineSNP50 genotyping array.

Jun-Seok Song, Ha-Seung Seong, Bong-Hwan Choi, Chang-Woo Lee, Nam-Hyun Hwang, Dajeong Lim, Joon-Hee Lee, Jin Soo Kim, Jeong-Dae Kim, Yeon-Soo Park and 2 more

Abstract read
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In one paragraph

Article in Genes & genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Quality Properties and Flavor-Related Components of BeefFood science of animal resources · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jun-Seok SongCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Ha-Seung SeongCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Bong-Hwan ChoiDivision of Animal Genomics and Bioinformatics, National Institute of Animal Science, RDA, Wanju, 55365, Republic of Korea.
Chang-Woo LeeGangwon Province Livestock Technology Research Institute, Hoengseong, 225-830, Republic of Korea.
Nam-Hyun HwangCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Dajeong LimDivision of Animal Genomics and Bioinformatics, National Institute of Animal Science, RDA, Wanju, 55365, Republic of Korea.
Joon-Hee LeeInstitute of Agriculture & Life Science, College of Agriculture and Life Sciences, Gyeongsang National University, Jinju, 52828, Republic of Korea.
Jin Soo KimCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Jeong-Dae KimCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Yeon-Soo ParkGangwon Province Livestock Technology Research Institute, Hoengseong, 225-830, Republic of Korea.
Jung-Woo ChoiCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea. jungwoo.kor@gmail.com.
Jong-Bok KimCollege of Animal Life Science, Kangwon National University, Chuncheon, 24341, Republic of Korea. jbkim@kangwon.ac.kr.
Kangwon National University · KRNational Institute of Animal Science · KRGyeongsang National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hanwoo and Chikso are classified as Korean native cattle breeds that are currently registered with the Food and Agriculture Organization. However, there is still a lack of genomic studies to compare Hanwoo to Chikso populations. The objective of this study was to perform genome-wide analysis of Hanwoo and Chikso populations, investigating the genetic relationships between these two populations. We genotyped a total of 319 cattle including 214 Hanwoo and 105 Chikso sampled from Gangwon Province Livestock Technology Research Institute, using the Illumina Bovine SNP50K Beadchip. After performing quality control on the initially generated datasets, we assessed linkage disequilibrium patterns for all the possible SNP pairs within 1 Mb apart. Overall, average r

Indexed as

Genome-Wide Association StudyAnimalsCattleCell DifferentiationGenotypeGenotyping TechniquesHeterozygotePolymorphism, Single NucleotidePrincipal Component AnalysisReceptors, LDLReceptor, trkBReceptors, LDLReceptor, trkBBovine SNP50K BeadChipChiksoHanwooLinkage disequilibrium

Identifiers

PMID30168091
OpenAlexW2889137540

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.