Evidence map›Paper›PMID 30167126›Full record

ArticleLight, science & applications2016

Super-resolution dipole orientation mapping via polarization demodulation.

Karl Zhanghao, Long Chen, Xu-San Yang, Miao-Yan Wang, Zhen-Li Jing, Hong-Bin Han, Michael Q Zhang, Dayong Jin, Jun-Tao Gao, Peng Xi

Open access · goldAbstract read
In one paragraph

Article in Light, science & applications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
18.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 125 citations in OpenAlex.

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  12. Imaging nanoscale axial dynamics at the basal plasma membrane.The international journal of biochemistry & cell biology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Karl ZhanghaoDepartment of Biomedical Engineering, College of Engineering, Peking University, Beijing 100871, China.ORCID 0000-0002-8331-6240
Long ChenDepartment of Automation, Tsinghua University, Beijing 100084, China.
Xu-San YangDepartment of Biomedical Engineering, College of Engineering, Peking University, Beijing 100871, China.
Miao-Yan WangDepartment of Biomedical Engineering, College of Engineering, Peking University, Beijing 100871, China.
Zhen-Li JingDepartment of Automation, Tsinghua University, Beijing 100084, China.
Hong-Bin HanDepartment of Radiology, Peking University Third Hospital, Beijing 100191, China.
Michael Q ZhangBioinformatics Division, TNLIST, MOE Key Laboratory of Bioinformatics and Center for Synthetic & Systems Biology, Tsinghua University, Beijing 100084, China.
Dayong JinInstitute for Biomedical Materials and Devices (IBMD), Faculty of Science, University of Technology Sydney, NSW 2007, Australia.ORCID 0000-0003-1046-2666
Jun-Tao GaoDepartment of Automation, Tsinghua University, Beijing 100084, China.
Peng XiDepartment of Biomedical Engineering, College of Engineering, Peking University, Beijing 100871, China.ORCID 0000-0001-6626-4840
Peking University · CNTsinghua University · CNUniversity of Technology Sydney · AUThe University of Texas at Dallas · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fluorescence polarization microscopy (FPM) aims to detect the dipole orientation of fluorophores and to resolve structural information for labeled organelles via wide-field or confocal microscopy. Conventional FPM often suffers from the presence of a large number of molecules within the diffraction-limited volume, with averaged fluorescence polarization collected from a group of dipoles with different orientations. Here, we apply sparse deconvolution and least-squares estimation to fluorescence polarization modulation data and demonstrate a super-resolution dipole orientation mapping (SDOM) method that resolves the effective dipole orientation from a much smaller number of fluorescent molecules within a sub-diffraction focal area. We further apply this method to resolve structural details in both fixed and live cells. For the first time, we show that different borders of a dendritic spine neck exhibit a heterogeneous distribution of dipole orientation. Furthermore, we illustrate that the dipole is always perpendicular to the direction of actin filaments in mammalian kidney cells and radially distributed in the hourglass structure of the septin protein under specific labelling. The accuracy of the dipole orientation can be further mapped using the orientation uniform factor, which shows the superiority of SDOM compared with its wide-field counterpart as the number of molecules is decreased within the smaller focal area. Using the inherent feature of the orientation dipole, the SDOM technique, with its fast imaging speed (at sub-second scale), can be applied to a broad range of fluorescently labeled biological systems to simultaneously resolve the valuable dipole orientation information with super-resolution imaging.

Indexed as

dipolefluorescence polarization microscopyorientation mappingpolarization modulationsuper-resolution

Identifiers

PMID30167126
PMCPMC6059828
OpenAlexW2532379207

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.