Evidence map›Paper›PMID 30166706›Full record

ArticleTransactions of the American Clinical and Climatological Association2018

CELL FATE DETERMINATION IN 3D: REGULATION OF GENE EXPRESSION VIA CHROMATIN INTERACTIONS WITH THE NUCLEAR MEMBRANE.

Jonathan A Epstein

Open access · greenAbstract read
In one paragraph

Article in Transactions of the American Clinical and Climatological Association, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 82% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Jonathan A EpsteinPHILADELPHIA, PENNSYLVANIA.
Philadelphia University · US

Funding

An unusual homeobox gene required for heart developmentR01HL071546 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI EPSTEIN, JONATHAN A. · 2003 to 2017
$4.9M
The role of nuclear architecture in cardiac developmentR01HL131611 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI EPSTEIN, JONATHAN A. · 2016 to 2017
$804k
NHLBI NIH HHS R01 HL071546NHLBI NIH HHS R01 HL131611
6 · The paper itself

Abstract

In the nucleus of all cells, DNA is packaged in association with histone proteins to form chromatin. It is becoming increasingly clear that the organization of chromatin in three dimensions within the nucleus is highly regulated and can contribute to gene expression and cell function. The regions of the genome that are near the nuclear periphery are termed "lamin associated domains" or LADs (1-3). Here, I present a theory, based on recent results, for "chromatin competence" in which the organization of LADs in a progenitor cell accounts for the ability of that cell to respond to external factors to promote differentiation into one lineage or another. I propose that a cell can only respond to an inductive cue if the downstream genes are available for activation, and that genes are not available for activation if they are sequestered in LADs.

Indexed as

Cell LineageChromatin Assembly and DisassemblyGene Expression Regulation, DevelopmentalAnimalsCell DifferentiationChromatinDNA MethylationEpigenesis, GeneticHistone Deacetylase 3Histone DeacetylasesHistonesHumansMyocytes, CardiacNuclear EnvelopeNucleic Acid ConformationPhenotypeChromatinHistone Deacetylase 3Histone DeacetylasesHistones

Identifiers

PMID30166706
PMCPMC6116621
OpenAlexW3017249304

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.