Evidence map›Paper›PMID 30165568›Full record

ArticleBioinformatics (Oxford, England)2019

AncestryView: data-driven visualization of whole-genome local-ancestry.

Yan Zhao, Li Ma, Sukun Jiang, George D Song, Shaohua He, Hong Li, Qing Song

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Bioinformatics (Oxford, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yan ZhaoDepartment of Single Cell Biology, First Affiliated Hospital, Xi'an Jiao tong University, Xi'an, China.
Li MaDepartment of R&D, 4DGenome Inc., Decatur, GA, USA.
Sukun JiangDepartment of R&D, 4DGenome Inc., Decatur, GA, USA.
George D SongCardiovascular Research Institute, Department of Medicine, Morehouse School of Medicine, Atlanta, GA, USA.
Shaohua HeDepartment of R&D, 4DGenome Inc., Decatur, GA, USA.
Hong LiDepartment of Allergy, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Qing SongDepartment of Single Cell Biology, First Affiliated Hospital, Xi'an Jiao tong University, Xi'an, China.

Funding

Morehouse Cardiovascular Research Center of ExcellenceP50HL117929 · NHLBI · MOREHOUSE SCHOOL OF MEDICINE · PI TAYLOR, HERMAN ALFRED · 2013 to 2018
$6.7M
Mosaic Haplotype Reference Panels for Minority PopulationsSC2GM121252 · NIGMS · MOREHOUSE SCHOOL OF MEDICINE · PI MA, LI · 2017 to 2019
$417k
Determining the Phased Genome SequencesR21HG006173 · NHGRI · MOREHOUSE SCHOOL OF MEDICINE · PI SONG, QING · 2012 to 2013
$389k
Cost-effective and high-throughput chromosomal haplotypingR43HG007621 · NHGRI · 4DGENOME, INC. · PI SONG, QING · 2014 to 2014
$219k
NHGRI NIH HHS R21 HG006173NHGRI NIH HHS R43 HG007621NHLBI NIH HHS P50 HL117929NIGMS NIH HHS SC2 GM121252
6 · The paper itself

Abstract

summaryData visualization is a crucial tool for data exploration, analysis and interpretation. To visualize the ancestry data, we developed a new software tool, called AncestryView. We demonstrate its functionality with the data from admixed individuals. AVAILABILITY AND IMPLEMENTATION: Freely available to non-commercial users on the web at https://f001.backblazeb2.com/file/=4DGenome/AncestryView.zip. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Indexed as

GenomeSoftwareHumans

Identifiers

PMID30165568
PMCPMC6394389

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.