ArticleGenome biology and evolution2018
Shared Transcriptional Control and Disparate Gain and Loss of Aphid Parasitism Genes.
Article in Genome biology and evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
33 citing papers in PubMed, 72 citations in OpenAlex.
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- Aphid effector pair Mp1-Mp58 forms an effector complex that targets a host trafficking protein.Journal of experimental botany · 2026Article
- Gene expression of pea aphid (Hemiptera: Aphididae) salivary effectors changes based on feeding duration and plant species.Journal of insect science (Online) · 2026Article
- Evolutionarily entrenched odorant receptors for (iScience · 2026Article
- Comprehensive Annotation of Olfactory and Gustatory Receptor Genes and Transposable Elements Revealed Their Evolutionary Dynamics in Aphids.Molecular biology and evolution · 2025Article
- Chromosome-level genome assembly of vetch aphid Megoura crassicauda (Hemiptera: Aphididae).Scientific data · 2025Article
- Chromosome-level genome assembly of the aphid Megoura crassicauda.Scientific data · 2025Article
- A chromosome-level genome assembly of the aphid Semiaphis heraclei (Takahashi).Scientific data · 2025Article
- Host plant flooding stress in soybeans differentially impacts avirulent and virulent soybean aphid (Aphis glycines) biotypes.Scientific reports · 2025Article
- Multi-omics approaches define novel aphid effector candidates associated with virulence and avirulence phenotypes.BMC genomics · 2024Article
- A gene with a thousand alleles: The hyper-variable effectors of plant-parasitic nematodes.Cell genomics · 2024Article
- A high-quality genome assembly of the waterlily aphid Rhopalosiphum nymphaeae.Scientific data · 2024Article
- Hybridisation has shaped a recent radiation of grass-feeding aphids.BMC biology · 2023Article
- Chromosome-level genome assembly of the spotted alfalfa aphid Therioaphis trifolii.Scientific data · 2023Article
- The genome and lifestage-specific transcriptomes of a plant-parasitic nematode and its host reveal susceptibility genes involved in trans-kingdom synthesis of vitamin B5.Nature communications · 2022Article
- Family dinner: Transcriptional plasticity of five Noctuidae (Lepidoptera) feeding on three host plant species.Ecology and evolution · 2022Article
- Virulence strategies of an insect herbivore and oomycete plant pathogen converge on host E3 SUMO ligase SIZ1.The New phytologist · 2022Article
- Chromosome-level genome assembly for the horned-gall aphid provides insights into interactions between gall-making insect and its host plant.Ecology and evolution · 2022Article
- Genome sequence of the English grain aphid, Sitobion avenae and its endosymbiont Buchnera aphidicola.G3 (Bethesda, Md.) · 2022Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
Abstract
Aphids are a diverse group of taxa that contain agronomically important species, which vary in their host range and ability to infest crop plants. The genome evolution underlying agriculturally important aphid traits is not well understood. We generated draft genome assemblies for two aphid species: Myzus cerasi (black cherry aphid) and the cereal specialist Rhopalosiphum padi. Using a de novo gene prediction pipeline on both these, and three additional aphid genome assemblies (Acyrthosiphon pisum, Diuraphis noxia, and Myzus persicae), we show that aphid genomes consistently encode similar gene numbers. We compare gene content, gene duplication, synteny, and putative effector repertoires between these five species to understand the genome evolution of globally important plant parasites. Aphid genomes show signs of relatively distant gene duplication, and substantial, relatively recent, gene birth. Putative effector repertoires, originating from duplicated and other loci, have an unusual genomic organization and evolutionary history. We identify a highly conserved effector pair that is tightly physically linked in the genomes of all aphid species tested. In R. padi, this effector pair is tightly transcriptionally linked and shares an unknown transcriptional control mechanism with a subset of ∼50 other putative effectors and secretory proteins. This study extends our current knowledge on the evolution of aphid genomes and reveals evidence for an as-of-yet unknown shared control mechanism, which underlies effector expression, and ultimately plant parasitism.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.