Evidence map›Paper›PMID 30165064›Full record

ArticleJournal of immunological methods2018

Development of T cell lines sensitive to antigen stimulation.

Theodore Williams, Harsha S Krovi, Laurie G Landry, Frances Crawford, Niyun Jin, Anita Hohenstein, Megan E DeNicola, Aaron W Michels, Howard W Davidson, Sally C Kent and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of immunological methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. De novo identification of CD4Nature methods · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Frontiers in endocrinology · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Inherent reactivity of unselected TCR repertoires to peptide-MHC molecules.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Theodore WilliamsBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA.
Harsha S KroviDepartment of Immunology and Microbiology, University of Colorado School of Medicine, 12800 E. 19(th) Avenue, Aurora, CO 80045, USA.
Laurie G LandryBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA.
Frances CrawfordDepartment of Biomedical Research, National Jewish Health, 1400 Jackson Street, Denver, CO 80206, USA.
Niyun JinBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA.
Anita HohensteinBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA.
Megan E DeNicolaDepartment of Medicine, Diabetes Center of Excellence, University of Massachusetts School of Medicine, 368 Plantation Street, ASC7-2012, Worcester, MA 01605, USA.
Aaron W MichelsBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA.
Howard W DavidsonBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA; Department of Immunology and Microbiology, University of Colorado School of Medicine, 12800 E. 19(th) Avenue, Aurora, CO 80045, USA.
Sally C KentDepartment of Medicine, Diabetes Center of Excellence, University of Massachusetts School of Medicine, 368 Plantation Street, ASC7-2012, Worcester, MA 01605, USA.
Laurent GapinDepartment of Immunology and Microbiology, University of Colorado School of Medicine, 12800 E. 19(th) Avenue, Aurora, CO 80045, USA.
John W KapplerBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA; Department of Immunology and Microbiology, University of Colorado School of Medicine, 12800 E. 19(th) Avenue, Aurora, CO 80045, USA; Department of Biomedical Research, National Jewish Health, 1400 Jackson Street, Denver, CO 80206, USA; Program in Structural Biology and Biochemistry, University of Colorado School of Medicine, Aurora, CO, USA. Electronic address: kapplerj@njhealth.org.
Maki NakayamaBarbara Davis Center for Childhood Diabetes, University of Colorado School of Medicine, 1775 Aurora Court, Aurora, CO 80045, USA; Department of Immunology and Microbiology, University of Colorado School of Medicine, 12800 E. 19(th) Avenue, Aurora, CO 80045, USA. Electronic address: maki.nakayama@ucdenver.edu.
University of Colorado Denver · USUniversity of Massachusetts Chan Medical School · USColorado School of Public Health · USNational Jewish Health · US

Funding

Project 3: Epitope Selection in Type 1 DiabetesP01AI118688 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KAPPLER, JOHN W · 2016 to 2020
$8.4M
CHARACTERISTICS OF T CELL RECEPTORSR01AI018785 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 1985 to 2022
$7.3M
Multiple Autoantigens/Multiple Epitopes of Type 1DMR01DK032083 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI MICHELS, AARON W · 1986 to 2025
$6.9M
Human Islet Research Network (HIRN) Coordinating CenterU01DK104162 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2014 to 2018
$6.1M
Molecular Dissection of Insulin Targeting in Anti-Islet AutoimmunityR01DK099317 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI AARON W MICHELS, Maki Nakayama · 2013 to 2026
$5.3M
Insulin Specific T Cell Response Shaped by Diabetes Protective MHC Class II MoleculesR01DK108868 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI AARON W MICHELS · 2017 to 2026
$3.6M
Analysis of human autoreactive T cell receptors in vivoUC4DK104223 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI GILL, RONALD G · 2014 to 2014
$2.0M
Insulin Specific T and B cells in Type 1 DiabetesDP3DK110845 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI CAMBIER, JOHN C, MICHELS, AARON W · 2016 to 2016
$1.7M
CHARACTERISTICS OF T-CELL RECEPTORSR37AI018785 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 1992 to 2001
$522k
Human islet-derived, islet-reactive T cells from subjects with Type 1 diabetesR21AI126189 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KENT, SALLY CHOATE · 2016 to 2017
$461k
Regulation of Natural Killer T cell lineage diversification by the Src-like Adaptor protein 2R21AI124076 · NIAID · UNIVERSITY OF COLORADO DENVER · PI GAPIN, LAURENT · 2016 to 2017
$422k
Characteristics of T Cell ReceptorsR56AI018785 · NIAID · NATIONAL JEWISH HEALTH · PI MARRACK, PHILIPPA C. · 2012 to 2012
$410k
NIAID NIH HHS P01 AI118688NIAID NIH HHS R01 AI018785NIAID NIH HHS R21 AI124076NIAID NIH HHS R21 AI126189NIAID NIH HHS R37 AI018785NIAID NIH HHS R56 AI018785NIDDK NIH HHS DP3 DK110845NIDDK NIH HHS R01 DK032083NIDDK NIH HHS R01 DK099317NIDDK NIH HHS R01 DK108868NIDDK NIH HHS U01 DK104162NIDDK NIH HHS UC4 DK104223
6 · The paper itself

Abstract

Immortalized T cells such as T cell hybridomas, transfectomas, and transductants are useful tools to study tri-molecular complexes consisting of peptide, MHC, and T cell receptor (TCR) molecules. These cells have been utilized for antigen discovery studies for decades due to simplicity and rapidness of growing cells. However, responsiveness to antigen stimulation is typically less sensitive compared to primary T cells, resulting in occasional false negative outcomes especially for TCRs having low affinity to a peptide-MHC complex (pMHC). To overcome this obstacle, we genetically engineered T cell hybridomas to express additional CD3 molecules as well as CD4 with two amino acid substitutions that increase affinity to MHC class II molecules. The manipulated T cell hybridomas that were further transduced with retroviral vectors encoding TCRs of interest responded to cognate antigens more robustly than non-manipulated cells without evoking non-antigen specific reactivity. Of importance, the manipulation with CD3 and mutated human CD4 expression was effective in increasing responsiveness of T cell hybridomas to a wide variety of TCR, peptide, and MHC combinations across class II genetic loci (i.e. HLA-DR, HLA-DQ, HLA-DP, and murine H2-IA) and species (i.e. both humans and mice), and thus will be useful to identify antigen specificity of T cells.

Indexed as

AntigensCD3 ComplexCell Line, TransformedHistocompatibility Antigens Class IIHumansHybridomasLymphocyte ActivationReceptors, Antigen, T-CellAntigensCD3 ComplexHistocompatibility Antigens Class IIReceptors, Antigen, T-CellAntigen discoveryCD4Genetic manipulationMHC class IIT cell hybridomas

Identifiers

PMID30165064
PMCPMC8006528
OpenAlexW2889452649

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.