Evidence map›Paper›PMID 30159617›Full record

ArticleMolecular genetics and genomics : MGG2019

Interspecific genetic maps in Miscanthus floridulus and M. sacchariflorus accelerate detection of QTLs associated with plant height and inflorescence.

Chunxia Ge, Xin Ai, Shengfeng Jia, Yinqing Yang, Lu Che, Zili Yi, Cuixia Chen

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Article in Molecular genetics and genomics : MGG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4 citing papers in PubMed.

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7 authors.

Chunxia GeState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, Shandong, China.
Xin AiCollege of Horticulture and Landscape, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Shengfeng JiaState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, Shandong, China.
Yinqing YangState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, Shandong, China.
Lu CheNetwork Information Technology Center, Shandong Agricultural University, Taian, 271018, Shandong, China.
Zili YiCollege of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Cuixia ChenState Key Laboratory of Crop Biology, Shandong Agricultural University, Taian, 271018, Shandong, China. cxchen@sdau.edu.cn.

Funding

National Natural Sciences Foundation of China 31071471National Natural Sciences Foundation of China 31271352
6 · The paper itself

Abstract

Miscanthus is recognized as a promising lignocellulosic crop for the production of bioethanol and bioproducts worldwide. To facilitate the identification of agronomical important traits and establish genetics knowledge, two genetic maps were developed from a controlled interspecific cross between M. floridulus and M. sacchariflorus. A total of 650 SSR markers were mapped in M. floridulus, spanning 19 linkage groups and 2053.31 cM with an average interval of 3.25 cM. The map of M. sacchariflorus comprised 495 SSR markers in 19 linkage groups covering 1684.86 cM with an average interval of 3.54 cM. The estimation on genome length indicated that the genome coverage of parental genetic maps were 93.87% and 89.91%, respectively. Eighty-eight bi-parental common markers were allowed to connect the two maps, and six pairs of syntenic linkage groups were recognized. Furthermore, quantitative trait loci (QTL) mapping of three agronomic traits, namely, plant height (PH), heading time (HT), and flowering time (FT), demonstrated that a total of 66 QTLs were identified in four consecutive years using interval mapping and multiple-QTL model. The LOD value of these QTLs ranged from 2.51 to 10.60, and the phenotypic variation explained varied from 9.50 to 37.10%. QTL cluster in syntenic groups MF19/MS7 contained six stable QTLs associated with PH, HT, and FT. In conclusion, we report for the first time the genetic mapping of biomass traits in M. floridulus and M. sacchariflorus. These results will be a valuable genetic resource, facilitating the discovery of essential genes and breeding of Miscanthus.

Indexed as

Quantitative Trait LociAndropogonChromosome MappingGenetic LinkageGenome, PlantInflorescenceMicrosatellite RepeatsPlant BreedingBiomassGenetic mapMiscanthusQTL mappingSSR

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.