Evidence map›Paper›PMID 30154546›Full record

ArticleScientific reports2018

Targeted matrisome analysis identifies thrombospondin-2 and tenascin-C in aligned collagen stroma from invasive breast carcinoma.

Lucas A Tomko, Ryan C Hill, Alexander Barrett, Joseph M Szulczewski, Matthew W Conklin, Kevin W Eliceiri, Patricia J Keely, Kirk C Hansen, Suzanne M Ponik

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Biomedicines · 2026
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  6. Review
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  8. Polychromatic Polarization Microscopy Differentiates Collagen Fiber Signatures in Benign Pancreatic Tissue and Pancreatic Ductal Adenocarcinoma.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2025
    Article
  9. Article
  10. Targeting breast tumor extracellular matrix and stroma utilizing nanoparticles.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  11. Article
  12. Review
  13. Review
  14. Article
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Lucas A TomkoDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison, 1111 Highland Ave., WIMR II Rm. 4528, Madison, WI, 53705, United States.
Ryan C HillDepartment of Biochemistry and Molecular Genetics, University of Colorado-Denver, 12801 E. 17th Avenue, Bldg. RC-1 South, Aurora, CO, 80045, United States.
Alexander BarrettDepartment of Biochemistry and Molecular Genetics, University of Colorado-Denver, 12801 E. 17th Avenue, Bldg. RC-1 South, Aurora, CO, 80045, United States.
Joseph M SzulczewskiDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison, 1111 Highland Ave., WIMR II Rm. 4528, Madison, WI, 53705, United States.
Matthew W ConklinDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison, 1111 Highland Ave., WIMR II Rm. 4528, Madison, WI, 53705, United States.
Kevin W EliceiriLaboratory for Optical and Computational Instrumentation, University of Wisconsin at Madison, 1675 Observatory Dr., Madison, WI, 53706, United States.
Patricia J KeelyDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison, 1111 Highland Ave., WIMR II Rm. 4528, Madison, WI, 53705, United States.
Kirk C HansenDepartment of Biochemistry and Molecular Genetics, University of Colorado-Denver, 12801 E. 17th Avenue, Bldg. RC-1 South, Aurora, CO, 80045, United States. Kirk.Hansen@UCDenver.edu.
Suzanne M PonikDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison, 1111 Highland Ave., WIMR II Rm. 4528, Madison, WI, 53705, United States. ponik@wisc.edu.
University of Wisconsin–Madison · USUniversity of Colorado Denver · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
Role of Beta-Catenin in Urinary DysfunctionU54DK104310 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI MACOSKA, JILL A., MARKER, PAUL C · 2014 to 2023
$12.8M
Translational Pulmonary Vascular Biology ProgramT32HL007171 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI Sonia Castro Flores, Tim Lahm · 1985 to 2026
$9.4M
Training Program In Molecular AND Cellular PharmacologyT32GM008688 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 1998 to 2020
$6.0M
Matrix density promotes pro-tumorigenic hormone actions in breast cancerR01CA179556 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI PONIK, SUZANNE MARIE, SCHULER, LINDA A. · 2014 to 2024
$4.9M
Exosome secretion in breast cancer progressionR01CA206458 · NCI · VANDERBILT UNIVERSITY · PI PONIK, SUZANNE MARIE, WEAVER, ALISSA M · 2016 to 2025
$4.6M
Mechanisms Of Cell Migration On 3D Aligned MatricesR01CA142833 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI FRIEDL, ANDREAS, HAHN, KLAUS M. · 2010 to 2020
$3.4M
An automated high-throughput tissue model for screening metastatic effectorsR01CA186134 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BEEBE, DAVID J · 2015 to 2019
$3.1M
[PQC-3] A Metabolic Pathway Activation Marker for Prostate Cancer PrognosisR01CA185251 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BASU, HIRAK S., BEEBE, DAVID J · 2014 to 2017
$2.9M
Collagen structural changes as an early biomarker for breast carcinomaR01CA199996 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI CONKLIN, MATTHEW W · 2015 to 2019
$2.2M
Advanced Methods to Evaluate Extracellular Matrix and Crosslinking in the Tumor MR33CA183685 · NCI · UNIVERSITY OF COLORADO DENVER · PI HANSEN, KIRK C, WEAVER, VALERIE MARIE · 2014 to 2016
$1.1M
Quadrupole-Orbitrap Mass SpectrometerS10OD021641 · OD · UNIVERSITY OF COLORADO DENVER · PI HANSEN, KIRK C · 2017 to 2017
$600k
NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA142833NCI NIH HHS R01 CA179556NCI NIH HHS R01 CA185251NCI NIH HHS R01 CA186134NCI NIH HHS R01 CA199996NCI NIH HHS R01 CA206458NCI NIH HHS R33 CA183685NHLBI NIH HHS T32 HL007171NIDDK NIH HHS U54 DK104310NIGMS NIH HHS T32 GM008688NIH HHS S10 OD021641U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA179556U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA185251U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA186134U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA199996U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA206458U.S. Department of Health & Human Services | National Institutes of Health (NIH) DK104310
6 · The paper itself

Abstract

Increasing evidence demonstrates an important role for the extracellular matrix (ECM) in breast cancer progression. Collagen type I, a core constituent of the fibrous ECM, undergoes a significant set of changes that accompany tumor progression, termed Tumor Associated Collagen Signatures (TACS). Late stages of this progression are characterized by the presence of bundled, straight collagen (TACS-2) that become oriented perpendicular to the tumor-stromal boundary (TACS-3). Importantly, the presence of TACS-3 collagen is an independent predictor of poor patient outcome. At present, it remains unclear whether reorganization of the collagen matrix is the consequence of mechanical or compositional tissue remodeling. Here, we identify compositional changes in ECM correlating to collagen fiber reorganization from nineteen normal and invasive ductal carcinoma (IDC) patient biopsies using matrisome-targeted proteomics. Twenty-seven ECM proteins were significantly altered in IDC samples compared to normal tissue. Further, a set of nineteen matrisome proteins positively correlate and five proteins inversely correlate with IDC tissues containing straightened collagen fibers. Tenascin-C and thrombospondin-2 significantly co-localized with aligned collagen fibers in IDC tissues. This study highlights the compositional change in matrisome proteins accompanying collagen re-organization during breast cancer progression and provides candidate proteins for investigation into cellular and structural influences on collagen alignment.

Indexed as

Tumor MicroenvironmentBreastBreast NeoplasmsCarcinoma, Ductal, BreastCollagenExtracellular MatrixExtracellular Matrix ProteinsFemaleHumansNeoplasm ProteinsProteomicsStromal CellsTenascinThrombospondin 2ThrombospondinsCollagenExtracellular Matrix ProteinsNeoplasm ProteinsTenascinThrombospondin 2ThrombospondinsTNC protein, human

Identifiers

PMID30154546
PMCPMC6113240
OpenAlexW2888588223

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.