Evidence map›Paper›PMID 30154241›Full record

ArticleThe Journal of biological chemistry2018

Structural analysis reveals pathomechanisms associated with pseudoxanthoma elasticum-causing mutations in the ABCC6 transporter.

Yanchao Ran, Aiping Zheng, Patrick H Thibodeau

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Non-exudative macular neovascularization in pseudoxanthoma elasticum.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2021
    Article
  5. Review
  6. The Structure and Mechanism of Drug Transporters.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  7. Reassessment of causality of ABCC6 missense variants associated with pseudoxanthoma elasticum based on Sherloc.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yanchao RanFrom the Department of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15219.
Aiping ZhengFrom the Department of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15219.
Patrick H ThibodeauFrom the Department of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15219 thibodea@pitt.edu.ORCID 0000-0002-6790-144X
University of Pittsburgh · US

Funding

Regulated biosynthesis and function of ABC-transport systemsR01DK083284 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI THIBODEAU, PATRICK H · 2011 to 2015
$1.7M
Altered biosynthesis and function of ABCC6 in systemic mineralization disordersR01GM122091 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI THIBODEAU, PATRICK H · 2017 to 2020
$1.4M
Biosynthesis and function of ABC transportersR56DK083284 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI THIBODEAU, PATRICK H · 2010 to 2010
$227k
NIDDK NIH HHS R01 DK083284NIDDK NIH HHS R56 DK083284NIGMS NIH HHS R01 GM122091
6 · The paper itself

Abstract

Mutations in ABC subfamily C member 6 (ABCC6) transporter are associated with pseudoxanthoma elasticum (PXE), a disease resulting in ectopic mineralization and affecting multiple tissues. A growing number of mutations have been identified in individuals with PXE. For most of these variants, no mechanistic information is available regarding their role in normal and pathophysiologies. To assess how PXE-associated mutations alter ABCC6 biosynthesis and structure, we biophysically and biochemically evaluated the N-terminal nucleotide-binding domain. A high-resolution X-ray structure of nucleotide-binding domain 1 (NBD1) of human ABCC6 was obtained at 2.3 Å that provided a template on which to evaluate PXE-causing mutations. Biochemical analysis of mutations in this domain indicated that multiple PXE-causing mutations altered its structural properties. Analyses of the full-length protein revealed a strong correlation between the alterations in NBD properties and the processing and expression of ABCC6. These results suggest that a significant fraction of PXE-associated mutations located in NBD1 causes changes in its structural properties and that these mutation-induced alterations directly affect the maturation of the full-length ABCC6 protein.

Indexed as

Amino Acid SequenceATP-Binding Cassette, Sub-Family C ProteinsCrystallography, X-RayGlycosylationHEK293 CellsHumansMutationProtein ConformationProtein DomainsPseudoxanthoma ElasticumSequence AlignmentABCC6 protein, humanATP-Binding Cassette, Sub-Family C ProteinsABCC6ABC transporterconnective tissueconnective tissue disorderelastic fiberglycoprotein biosynthesismembrane proteinprotein foldingprotein misfoldingprotein stabilityprotein structurepseudoxanthoma elasticumX-ray crystallography

Identifiers

PMID30154241
PMCPMC6187630
OpenAlexW2889302335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.