Evidence map›Paper›PMID 30154210›Full record

ArticleJournal of cell science2018

Rab4A organizes endosomal domains for sorting cargo to lysosome-related organelles.

Sudeshna Nag, Shikha Rani, Sarmistha Mahanty, Christin Bissig, Pooja Arora, Cristina Azevedo, Adolfo Saiardi, Peter van der Sluijs, Cedric Delevoye, Guillaume van Niel and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

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  11. Endosome Traffic Modulates Pro-Inflammatory Signal Transduction in CD4International journal of molecular sciences · 2023
    Review
  12. Article
  13. Article
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  15. Review
  16. Article
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  18. Article
  19. Melanosome Biogenesis in the Pigmentation of Mammalian Skin.Integrative and comparative biology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Sudeshna NagDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India 560 012.ORCID 0000-0002-7313-1058
Shikha RaniDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India 560 012.ORCID 0000-0002-9574-9406
Sarmistha MahantyDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India 560 012.
Christin BissigInstitut Curie, PSL Research University, CNRS, UMR 144, Structure and Membrane Compartments, F-75005, Paris, France.
Pooja AroraDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India 560 012.ORCID 0000-0002-3028-6615
Cristina AzevedoMedical Research Council Laboratory for Molecular Cell Biology, University College London, Gower Street, London, WC1E 6BT, UK.
Adolfo SaiardiMedical Research Council Laboratory for Molecular Cell Biology, University College London, Gower Street, London, WC1E 6BT, UK.
Peter van der SluijsCellular Protein Chemistry, Bijvoet Center for Biomolecular Research, Utrecht University, 3584 CH Utrecht, The Netherlands.
Cedric DelevoyeInstitut Curie, PSL Research University, CNRS, UMR 144, Structure and Membrane Compartments, F-75005, Paris, France.
Guillaume van NielInstitut Curie, PSL Research University, CNRS, UMR 144, Structure and Membrane Compartments, F-75005, Paris, France.
Graca RaposoInstitut Curie, PSL Research University, CNRS, UMR 144, Structure and Membrane Compartments, F-75005, Paris, France.
Subba Rao Gangi SettyDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India 560 012 subba@iisc.ac.in.ORCID 0000-0003-4035-2900
Indian Institute of Science Bangalore · INCentre National de la Recherche Scientifique · FRMRC Laboratory for Molecular Cell Biology · GBUtrecht University · NL

Funding

DBT-Wellcome Trust India Alliance 500122-Z-09-ZMedical Research Council MC_U122680443Medical Research Council MC_UU_00012/4Medical Research Council MC_UU_12018/4Wellcome Trust
6 · The paper itself

Abstract

Sorting endosomes (SEs) are the regulatory hubs for sorting cargo to multiple organelles, including lysosome-related organelles, such as melanosomes in melanocytes. In parallel, melanosome biogenesis is initiated from SEs with the processing and sequential transport of melanocyte-specific proteins toward maturing melanosomes. However, the mechanism of cargo segregation on SEs is largely unknown. Here, RNAi screening in melanocytes revealed that knockdown of Rab4A results in defective melanosome maturation. Rab4A-depletion increases the number of vacuolar endosomes and disturbs the cargo sorting, which in turn lead to the mislocalization of melanosomal proteins to lysosomes, cell surface and exosomes. Rab4A localizes to the SEs and forms an endosomal complex with the adaptor AP-3, the effector rabenosyn-5 and the motor KIF3, which possibly coordinates cargo segregation on SEs. Consistent with this, inactivation of rabenosyn-5, KIF3A or KIF3B phenocopied the defects observed in Rab4A-knockdown melanocytes. Further, rabenosyn-5 was found to associate with rabaptin-5 or Rabip4/4' (isoforms encoded by

Indexed as

EndosomesHumansLysosomesrab4 GTP-Binding Proteinsrab4 GTP-Binding ProteinsAP-3KIF3Melanosome biogenesisRab4ARabaptin-5Rabenosyn-5Rabip4′Sorting endosome

Identifiers

PMID30154210
PMCPMC6151265
OpenAlexW2889411851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.