Evidence map›Paper›PMID 30152529›Full record

ArticleJournal of neuroscience research2020

Defining parameters of specificity for bioluminescent optogenetic activation of neurons using in vitro multi electrode arrays (MEA).

Mansi Prakash, William E Medendorp, Ute Hochgeschwender

Abstract read
In one paragraph

Article in Journal of neuroscience research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Engineering luminopsins with improved coupling efficiencies.bioRxiv : the preprint server for biology · 2023
    Article
  5. Article
  6. Bioluminescence-Optogenetics: A Practical Guide.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mansi PrakashNeuroscience Program, Central Michigan University, Pleasant, Michigan.
William E MedendorpNeuroscience Program, Central Michigan University, Pleasant, Michigan.
Ute HochgeschwenderNeuroscience Program, Central Michigan University, Pleasant, Michigan.ORCID 0000-0001-5165-6518
Central Michigan University · US

Funding

BioLuminescent OptoGenetics (BL-OG): A Novel and Versatile Strategy for NeuromodulationU01NS099709 · NINDS · CENTRAL MICHIGAN UNIVERSITY · PI HOCHGESCHWENDER, UTE H, MOORE, CHRISTOPHER I · 2016 to 2018
$2.4M
Employing subcellular calcium to control membrane voltageR21EY026427 · NEI · CENTRAL MICHIGAN UNIVERSITY · PI HOCHGESCHWENDER, UTE H, LIPSCOMBE, DIANE · 2015 to 2016
$472k
Genetically Encoded Light-Production and Light-Sensing for Neuronal ManipulationR21MH101525 · NIMH · DUKE UNIVERSITY · PI HOCHGESCHWENDER, UTE H · 2013 to 2015
$434k
National Science Foundation CBET-1464686National Science Foundation DBI-1707352NEI NIH HHS R21 EY026427NIH HHS R21EY026427NIH HHS R21MH101525NIH HHS U01NS099709NIMH NIH HHS R21 MH101525NINDS NIH HHS U01 NS099709W. M. Keck Foundation
6 · The paper itself

Abstract

In Bioluminescent Optogenetics (BL-OG) a biological, rather than a physical, light source is used to activate light-sensing opsins, such as channelrhodopsins or pumps. This is commonly achieved by utilizing a luminopsin (LMO), a fusion protein of a light-emitting luciferase tethered to a light-sensing opsin. Light of the wavelength matching the activation peak of the opsin is emitted by the luciferase upon application of its small molecule luciferin, resulting in activation of the fused opsin and subsequent effects on membrane potential. Using optimized protocols for culturing, transforming, and testing primary neurons in multi electrode arrays, we systematically defined parameters under which changes in neuronal activity are specific to bioluminescent activation of opsins, rather than due to off-target effects of either the luciferin or its solvent on neurons directly, or on opsins directly. We further tested if there is a direct effect of bioluminescence on neurons. Critical for assuring specific BL-OG effects are testing the concentration and formulation of the luciferin against proper controls, including testing effects of vehicle on LMO expressing and of luciferin on nonLMO expressing targets.

Indexed as

LuciferasesLuminescent MeasurementsOpsinsAnimalsElectrodes, ImplantedFemaleLuminescent ProteinsMaleMembrane PotentialsNeuronsOptogeneticsPrimary Cell CultureRats, Sprague-DawleyLuciferasesLuminescent ProteinsOpsinscoelenterazineCTZ solventluminopsinopsinprimary neuron

Identifiers

PMID30152529
PMCPMC6395573
OpenAlexW2889059570

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.