Evidence map›Paper›PMID 30151748›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2018

Resistance to Rhynchosporium commune in a collection of European spring barley germplasm.

Mark E Looseley, Lucie L Griffe, Bianca Büttner, Kathryn M Wright, Jill Middlefell-Williams, Hazel Bull, Paul D Shaw, Malcolm Macaulay, Allan Booth, Günther Schweizer and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification of sources of resistance to scald (Frontiers in plant science · 2023
    Article
  4. Pyramiding of scald resistance genes in four spring barley MAGIC populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  5. Article
  6. Association mapping of malting quality traits in UK spring and winter barley cultivar collections.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Characterisation of barley resistance to rhynchosporium on chromosome 6HS.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 2 countries.

Mark E LooseleyThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK. mark.looseley@hutton.ac.uk.ORCID http://orcid.org/0000-0003-0170-8900
Lucie L GriffeThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Bianca BüttnerBavarian State Research Center for Agriculture, Institute for Crop Science and Plant Breeding, Am Gereuth 2, 85354, Freising, Germany.
Kathryn M WrightThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Jill Middlefell-WilliamsThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Hazel BullThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Paul D ShawThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Malcolm MacaulayThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Allan BoothThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Günther SchweizerBavarian State Research Center for Agriculture, Institute for Crop Science and Plant Breeding, Am Gereuth 2, 85354, Freising, Germany.
Joanne R RussellThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Robbie WaughThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
William T B ThomasThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
Anna AvrovaThe James Hutton Institute, Invergowrie, Dundee, DD2 5DA, Scotland, UK.
James Hutton Institute · GBBavarian State Research Center for Agriculture · DE

Funding

Bayerisches Staatsministerium für Ernährung, Landwirtschaft und Forsten 031B0199DBiotechnology and Biological Sciences Research Council BB/J019569/1Biotechnology and Biological Sciences Research Council BB/J019593/1Biotechnology and Biological Sciences Research Council B/K501906/1
6 · The paper itself

Abstract

key messageAssociation analyses of resistance to Rhynchosporium commune in a collection of European spring barley germplasm detected 17 significant resistance quantitative trait loci. The most significant association was confirmed as Rrs1. Rhynchosporium commune is a fungal pathogen of barley which causes a highly destructive and economically important disease known as rhynchosporium. Genome-wide association mapping was used to investigate the genetic control of host resistance to R. commune in a collection of predominantly European spring barley accessions. Multi-year disease nursery field trials revealed 8 significant resistance quantitative trait loci (QTL), whilst a separate association mapping analysis using historical data from UK national and recommended list trials identified 9 significant associations. The most significant association identified in both current and historical data sources, collocated with the known position of the major resistance gene Rrs1. Seedling assays with R. commune single-spore isolates expressing the corresponding avirulence protein NIP1 confirmed that this locus is Rrs1. These results highlight the significant and continuing contribution of Rrs1 to host resistance in current elite spring barley germplasm. Varietal height was shown to be negatively correlated with disease severity, and a resistance QTL was identified that co-localised with the semi-dwarfing gene sdw1, previously shown to contribute to disease escape. The remaining QTL represent novel resistances that are present within European spring barley accessions. Associated markers to Rrs1 and other resistance loci, identified in this study, represent a set of tools that can be exploited by breeders for the sustainable deployment of varietal resistance in new cultivars.

Indexed as

Quantitative Trait LociAscomycotaChromosome MappingDisease ResistanceGenetic Association StudiesGenetic MarkersGenotypeHordeumPhenotypePlant DiseasesPolymorphism, Single NucleotideGenetic Markers

Identifiers

PMID30151748
OpenAlexW2889028318

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.