Evidence map›Paper›PMID 30150630›Full record

ArticleScientific reports2018

Genome-wide Identification of PP2C Genes and Their Expression Profiling in Response to Drought and Cold Stresses in Medicago truncatula.

Qi Yang, Kun Liu, Xiaocui Niu, Qi Wang, Yongqing Wan, Feiyun Yang, Guojing Li, Yufen Wang, Ruigang Wang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
10.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 83 citations in OpenAlex.

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  12. Identification and Characterization of theInternational journal of molecular sciences · 2023
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  13. Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2023
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  17. Review
  18. Frontiers in plant science · 2023
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  19. Genome-wide characterization of theFrontiers in plant science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Qi YangInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China.
Kun LiuInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China.
Xiaocui NiuInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China.
Qi WangInstitute of Microbiology, Chinese Academy of Sciences, Beijing, P. R. China.
Yongqing WanInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China.
Feiyun YangInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China.
Guojing LiInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China.
Yufen WangKey Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, P. R. China. fenwy300@163.com.
Ruigang WangInner Mongolia Key Laboratory of Plant Stress Physiology and Molecular Biology, College of Life Sciences, Inner Mongolia Agricultural University, Hohhot, P. R. China. wangruigang@imau.edu.cn.
Inner Mongolia Agricultural University · CNInner Mongolia University · CNInstitute of Microbiology · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31760696
6 · The paper itself

Abstract

Type 2 C protein phosphatases (PP2Cs) represent the major group of protein phosphatases in plants and play important roles in various plant processes. In this study, 94 MtPP2C genes were identified from Medicago truncatula and further phylogenetically classified into 13 subfamilies, as supported by exon-intron organization and conserved motif composition. Collinearity analysis indicated that segmental duplication events played a crucial role in the expansion of MtPP2C gene families in M. truncatula. Furthermore, the expression profiles of MtPP2Cs under different abiotic treatments were analyzed using qRT-PCR. Results showed that these MtPP2Cs genes displayed different expression patterns in response to drought, cold and ABA stress conditions and some of the key stress responsive MtPP2Cs genes have been identified. Our study presents a comprehensive overview of the PP2C gene family in M. truncatula, which will be useful for further functional characterization of MtPP2Cs in plant drought and cold stress responses.

Indexed as

Cold-Shock ResponseDroughtsGene Expression Regulation, PlantGenome-Wide Association StudyChromosome MappingChromosomes, PlantComputational BiologyGene Expression ProfilingGenes, DuplicateGenes, PlantMedicago truncatulaPhylogenyProtein Phosphatase 2CStress, PhysiologicalTranscriptomeProtein Phosphatase 2C

Identifiers

PMID30150630
PMCPMC6110720
OpenAlexW2888578623

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.