Evidence map›Paper›PMID 30149496›Full record

ArticleViruses2018

Characterization of Unknown Orthobunya-Like Viruses from India.

Shannon L M Whitmer, Pragya D Yadav, Prasad Sarkale, Gouri Y Chaubal, Alicia Francis, John Klena, Stuart T Nichol, Ute Ströher, Devendra T Mourya

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

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  9. Proactive preparedness for Cat Que virus: AnThe Indian journal of medical research · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Shannon L M WhitmerViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA. evk3@cdc.gov.
Pragya D YadavNational Institute of Virology, Pune 411021, India. hellopragya22@gmail.com.ORCID 0000-0002-0861-7166
Prasad SarkaleNational Institute of Virology, Pune 411021, India. prasadsarkale123@rediffmail.com.
Gouri Y ChaubalNational Institute of Virology, Pune 411021, India. gourimgupte@gmail.com.
Alicia FrancisSchool of Biology, Georgia Institute of Technology, Atlanta, GA 30322, USA. avfrancis14@gmail.com.
John KlenaViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA. irc4@cdc.gov.
Stuart T NicholViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA. stn1@cdc.gov.
Ute StröherViral Special Pathogens Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA. ute.stroeher@gmail.com.
Devendra T MouryaNational Institute of Virology, Pune 411021, India. director.niv@icmr.gov.in.
Centers for Disease Control and Prevention · USICMR-National Institute of Virology · INGeorgia Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Next-generation sequencing (NGS) of agents causing idiopathic human diseases has been crucial in the identification of novel viruses. This study describes the isolation and characterization of two novel orthobunyaviruses obtained from a jungle myna and a paddy bird from Karnataka State, India. Using an NGS approach, these isolates were classified as Cat Que and Balagodu viruses belonging to the Manzanilla clade of the Simbu serogroup. Closely related viruses in the Manzanilla clade have been isolated from mosquitos, humans, birds, and pigs across a wide geographic region. Since Orthobunyaviruses exhibit high reassortment frequency and can cause acute, self-limiting febrile illness, these data suggest that human and livestock infections of the Oya/Cat Que/Manzanilla virus may be more widespread and/or under-reported than anticipated. It therefore becomes imperative to identify novel and unknown viruses in order to understand their role in human and animal pathogenesis. The current study is a step forward in this regard and would act as a prototype method for isolation, identification and detection of several other emerging viruses.

Indexed as

Genome, ViralRNA, ViralAnimalsBunyaviridae InfectionsChick EmbryoHigh-Throughput Nucleotide SequencingHumansIndiaMiceOrthobunyavirusPasseriformesPhylogenySerogroupSimbu virusSwineRNA, ViralCat Que virusManzanilla virusOrthobunyaviruspathogen discovery

Identifiers

PMID30149496
PMCPMC6165560
OpenAlexW2888256765

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.