Evidence map›Paper›PMID 30148988›Full record

ArticleThe Journal of investigative dermatology2019

Revisiting the Clinical and Biologic Relevance of Partial PTEN Loss in Melanoma.

Keith M Giles, Brooke E Rosenbaum, Marlies Berger, Allison Izsak, Yang Li, Irineu Illa Bochaca, Eleazar Vega-Saenz de Miera, Jinhua Wang, Farbod Darvishian, Hua Zhong and 1 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of investigative dermatology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Trial
  2. Review
  3. The Roles of PTEN in Melanoma Suppression.Pigment cell & melanoma research · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Annals of dermatology · 2021
    Article
  13. Frontiers in pharmacology · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Precise Immunodetection of PTEN Protein in Human Neoplasia.Cold Spring Harbor perspectives in medicine · 2019
    Review
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Keith M GilesThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA. Electronic address: keith.giles@nyumc.org.
Brooke E RosenbaumThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA.
Marlies BergerThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA.
Allison IzsakThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA.
Yang LiThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA.
Irineu Illa BochacaThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA.
Eleazar Vega-Saenz de MieraThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA.
Jinhua WangUniversity of Minnesota Institute for Health Informatics, Minneapolis, Minnesota, USA; Masonic Cancer Center; Minneapolis, Minnesota, USA.
Farbod DarvishianDepartment of Pathology, New York University School of Medicine, New York, New York, USA.
Hua ZhongDepartment of Population Health, New York University School of Medicine, New York, New York, USA.
Iman OsmanThe Ronald O. Perelman Department of Dermatology, New York University School of Medicine, New York, New York, USA. Electronic address: iman.osman@nyumc.org.
New York University · USUniversity of Minnesota · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR002494 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R, WEISDORF, DANIEL J · 2018 to 2022
$34.9M
Project 4P50CA225450 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI OSMAN, IMAN, WEBER, JEFFREY S · 2019 to 2025
$12.5M
A germline variant that predicts and modulates the response of melanoma to immunotherapyR21CA209309 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI OSMAN, IMAN · 2017 to 2018
$436k
NCATS NIH HHS UL1 TR002494NCI NIH HHS P30 CA016087NCI NIH HHS P50 CA225450NCI NIH HHS R21 CA209309
6 · The paper itself

Abstract

The extent of PTEN loss that confers clinical and biological impact in melanoma is unclear. We evaluated the clinical and biologic relevance of PTEN dosage in melanoma and tested the postulate that partial PTEN loss is due to epigenetic mechanisms. PTEN expression was assessed by immunohistochemistry in a stage III melanoma cohort (n = 190) with prospective follow up. Overall, 21 of 190 (11%) tumors had strong PTEN expression, 51 of 190 (27%) had intermediate PTEN, 44 of 190 (23%) had weak PTEN, and 74 of 190 (39%) had absent PTEN. Both weak and absent PTEN expression predicted shorter survival in multivariate analyses (hazard ratio = 2.13, P < 0.01). We show a continuous negative correlation between PTEN and activated Akt in melanoma cells with titrated PTEN expression and in two additional independent tumor datasets. PTEN genomic alterations (deletion, mutation), promoter methylation, and protein destabilization did not fully explain PTEN loss in melanoma, whereas PTEN levels increased with treatment of melanoma cells with the histone deacetylase inhibitor LBH589. Our data indicate that partial PTEN loss is due to modifiable epigenetic mechanisms and drives Akt activation and worse prognosis, suggesting a potential approach to improve the clinical outcome for a subset of patients with advanced melanoma.

Indexed as

Epigenesis, GeneticGene Expression Regulation, NeoplasticAdultAgedAged, 80 and overCell Line, TumorFemaleFollow-Up StudiesGene DosageHumansMaleMelanomaMiddle AgedMutationNeoplasm StagingPrognosisProto-Oncogene Proteins c-aktPTEN PhosphohydrolasePTEN protein, human

Identifiers

PMID30148988
PMCPMC6342667
OpenAlexW2888520284

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.