Evidence map›Paper›PMID 30148698›Full record

ArticleMicrobial drug resistance (Larchmont, N.Y.)2018

Whole-Genome Sequence Analysis of CTX-M Containing Escherichia coli Isolates from Retail Meats and Cattle in the United States.

Daniel A Tadesse, Cong Li, Sampa Mukherjee, Chih-Hao Hsu, Sonya Bodeis Jones, Stuart A Gaines, Claudine Kabera, Guy H Loneragan, Mary Torrence, Dayna M Harhay and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Microbial drug resistance (Larchmont, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 52 citations in OpenAlex.

  1. Dynamics and virulence ofApplied and environmental microbiology · 2026
    Article
  2. Article
  3. Integration sites ofFrontiers in microbiology · 2025
    Article
  4. Article
  5. Molecular identification ofJournal of veterinary research · 2023
    Article
  6. Description of Antimicrobial-ResistantVeterinary sciences · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Extended-Spectrum Beta-Lactamases ProducingAntibiotics (Basel, Switzerland) · 2022
    Review
  11. Molecular characteristics of ESBL-producingJournal of veterinary science · 2022
    Article
  12. Extended-Spectrum ß-Lactamase-ProducingFrontiers in cellular and infection microbiology · 2022
    Article
  13. Within-farm dynamics of ESBL-producingFrontiers in microbiology · 2022
    Article
  14. Article
  15. Identification of CTX-M Type ESBLPathogens (Basel, Switzerland) · 2021
    Article
  16. Article
  17. Article
  18. A Novel Structure HarboringAntibiotics (Basel, Switzerland) · 2021
    Article
  19. Emergence of Multidrug-ResistantFrontiers in cellular and infection microbiology · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Daniel A Tadesse1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Cong Li1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Sampa Mukherjee1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Chih-Hao Hsu1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Sonya Bodeis Jones1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Stuart A Gaines1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Claudine Kabera1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Guy H Loneragan2 Texas Tech University , Department of Animal and Food Science, Lubbock, Texas.
Mary Torrence3 U.S. FDA-CFSAN, Office of Applied Research and Safety Assessment (OARSA) , Laurel, Maryland.
Dayna M Harhay4 USDA-ARS, U.S. Meat Animal Research Center, Meat Safety and Quality Research Unit, Clay Center , Nebraska.
Patrick F McDermott1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Shaohua Zhao1 Division of Animal and Food Microbiology , U.S. FDA, CVM, Laurel, Maryland.
Center for Veterinary Medicine · USCenter for Food Safety and Applied Nutrition · USRoman L. Hruska U.S. Meat Animal Research Center · USTexas Tech University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, there have been increased reports on the detection of extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli and Salmonella strains from food-producing animals and animal products in the United States. We characterized 18 ESBL E. coli isolates from cattle (n = 5), chicken breast (n = 5), ground turkey (n = 6), ground beef (n = 1), and pork chops (n = 1) that were collected by the National Antimicrobial Resistance Monitoring System (NARMS) between 2011 and 2015. In vitro antimicrobial susceptibility testing was done against a panel of 14 antimicrobials followed by a secondary panel of 9 β-lactam agents. Whole-genome sequencing was used to characterize the resistome, plasmids, and the genetic structures of the ESBL genes. All ESBL-producing E. coli isolates were resistant to at least three antimicrobial classes and carried various bla

Indexed as

AnimalsAnti-Bacterial Agentsbeta-LactamasesCattleDrug Resistance, BacterialEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsHumansMeatPlasmidsUnited StatesWhole Genome SequencingAnti-Bacterial Agentsbeta-LactamasesEscherichia coli ProteinsCTX-MESBLEscherichia coli

Identifiers

PMID30148698
PMCPMC6154757
OpenAlexW2889332465

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.