Evidence map›Paper›PMID 30148492›Full record

ArticleJournal of visualized experiments : JoVE2018

Production and Visualization of Bacterial Spheroplasts and Protoplasts to Characterize Antimicrobial Peptide Localization.

Dania M Figueroa, Heidi M Wade, Katrina P Montales, Donald E Elmore, Louise E O Darling

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In one paragraph

Article in Journal of visualized experiments : JoVE, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
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  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dania M FigueroaBiochemistry Program, Wellesley College.
Heidi M WadeBiochemistry Program, Wellesley College; Department of Chemistry, Wellesley College.
Katrina P MontalesDepartment of Chemistry, Wellesley College.
Donald E ElmoreBiochemistry Program, Wellesley College; Department of Chemistry, Wellesley College; delmore@wellesley.edu.
Louise E O DarlingBiochemistry Program, Wellesley College; Department of Biological Sciences, Wellesley College; ldarling@wellesley.edu.

Funding

Characterization and Design of Histone-Derived Antimicrobial PeptidesR15AI079685 · NIAID · WELLESLEY COLLEGE · PI ELMORE, DONALD E. · 2010 to 2015
$630k
NIAID NIH HHS R15 AI079685
6 · The paper itself

Abstract

The use of confocal microscopy as a method to assess peptide localization patterns within bacteria is commonly inhibited by the resolution limits of conventional light microscopes. As the resolution for a given microscope cannot be easily enhanced, we present protocols to transform the small rod-shaped gram-negative Escherichia coli (E. coli) and gram-positive Bacillus megaterium (B. megaterium) into larger, easily imaged spherical forms called spheroplasts or protoplasts. This transformation allows observers to rapidly and clearly determine whether peptides lodge themselves into the bacterial membrane (i.e., membrane localizing) or cross the membrane to enter the cell (i.e., translocating). With this approach, we also present a systematic method to characterize peptides as membrane localizing or translocating. While this method can be used for a variety of membrane-active peptides and bacterial strains, we demonstrate the utility of this protocol by observing the interaction of Buforin II P11A (BF2 P11A), an antimicrobial peptide (AMP), with E. coli spheroplasts and B. megaterium protoplasts.

Indexed as

Microscopy, ConfocalPeptidesProtoplastsSpheroplastsPeptides

Identifiers

PMID30148492
PMCPMC6126710

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.