Evidence map›Paper›PMID 30146671›Full record

ArticleMolecular genetics and genomics : MGG2019

First report on B chromosome content in a reptilian species: the case of Anolis carolinensis.

Ilya G Kichigin, Artem P Lisachov, Massimo Giovannotti, Alex I Makunin, Marsel R Kabilov, Patricia C M O'Brien, Malcolm A Ferguson-Smith, Alexander S Graphodatsky, Vladimir A Trifonov

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Article in Molecular genetics and genomics : MGG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. B chromosomes put the 'super' in supernumerary.Trends in genetics : TIG · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ilya G KichiginInstitute of Molecular and Cellular Biology SB RAS, Novosibirsk, 630090, Russia. kig@mcb.nsc.ru.
Artem P LisachovInstitute of Cytology and Genetics SB RAS, Novosibirsk, 630090, Russia.
Massimo GiovannottiDipartimento di Scienze della Vita e dell'Ambiente, Università Politecnica delle Marche, via Brecce Bianche, 60131, Ancona, Italy.
Alex I MakuninInstitute of Molecular and Cellular Biology SB RAS, Novosibirsk, 630090, Russia.
Marsel R KabilovInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, 630090, Russia.
Patricia C M O'BrienCambridge Resource Centre for Comparative Genomics, Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, CB3 0ES, UK.
Malcolm A Ferguson-SmithCambridge Resource Centre for Comparative Genomics, Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, CB3 0ES, UK.
Alexander S GraphodatskyInstitute of Molecular and Cellular Biology SB RAS, Novosibirsk, 630090, Russia.
Vladimir A TrifonovInstitute of Molecular and Cellular Biology SB RAS, Novosibirsk, 630090, Russia.

Funding

Russian Foundation for Basic Research RFBR, 16-04-00087Russian Science Foundation RSF, 16-14-10009
6 · The paper itself

Abstract

Supernumerary elements of the genome are often called B chromosomes. They usually consist of various autosomal sequences and, because of low selective pressure, are mostly pseudogenized and contain many repeats. There are numerous reports on B chromosomes in mammals, fish, invertebrates, plants, and fungi, but only a few of them have been studied using sequencing techniques. However, reptilian supernumerary chromosomes have been detected only cytogenetically and never sequenced or analyzed at the molecular level. One model squamate species with available genome sequence is Anolis carolinensis. The scope of the present article is to describe the genetic content of A. carolinensis supernumerary chromosomes. In this article, we confirm the presence of B chromosomes in this species by reverse painting and synaptonemal complex analysis. We applied low-pass high-throughput sequencing to analyze flow-sorted B chromosomes. Anole B chromosomes exhibit similar traits to other supernumerary chromosomes from different taxons: they contain two genes related to cell division control (INCENP and SPIRE2), are enriched in specific repeats, and show a high degree of pseudogenization. Therefore, the present study confirms that reptilian B chromosomes resemble supernumerary chromosomes of other taxons.

Indexed as

AnimalsCell DivisionChromosomal Proteins, Non-HistoneChromosome MappingChromosome PaintingChromosomesEvolution, MolecularHigh-Throughput Nucleotide SequencingLizardsMicrofilament ProteinsPhylogenySequence Analysis, DNAChromosomal Proteins, Non-HistoneMicrofilament ProteinsCarolina anoleDOP-PCRHigh-throughput sequencingSquamataSupernumerary chromosomes

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.