Evidence map›Paper›PMID 30146263›Full record

ArticleClinical lung cancer2018

A miRNA Panel Predicts Sensitivity of FGFR Inhibitor in Lung Cancer Cell Lines.

Shengxiang Ren, Christopher J Rivard, Hui Yu, Carlo Genova, Leslie Rozenboom, Dexiang Gao, Trista K Hinz, Brad A Rikke, Murry W Wynes, Charles Caldwell and 6 more

Abstract read
In one paragraph

Article in Clinical lung cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Shengxiang RenDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO; Department of Medical Oncology, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.
Christopher J RivardDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Hui YuDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Carlo GenovaUniversity of Genova, Genova, Italy.
Leslie RozenboomDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Dexiang GaoDepartment of Medicine, Biostatistics and Informatics, University of Colorado Anschutz Medical Campus, Aurora, CO.
Trista K HinzDepartment of Medicine, Craniofacial Biology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Brad A RikkeDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Murry W WynesDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Charles CaldwellDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Francesco AgustoniDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Kenichi SudaDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Tao JiangDepartment of Medical Oncology, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.
Caicun ZhouDepartment of Medical Oncology, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.
Lynn E HeasleyDepartment of Medicine, Craniofacial Biology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Fred R HirschDepartment of Medicine, Medical Oncology, University of Colorado Anschutz Medical Campus, Aurora, CO. Electronic address: fred.hirsch@ucdenver.edu.
University of Colorado Anschutz Medical Campus · USTongji University · CNShanghai Pulmonary Hospital · CNUniversity of Genoa · IT

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Tissue Bank and Biomarkers CoreP50CA058187 · NCI · UNIVERSITY OF COLORADO DENVER · PI NEMENOFF, RAPHAEL A. · 1992 to 2018
$43.8M
FGF-2 Autocrine Signaling in Lung CancerR01CA127105 · NCI · UNIVERSITY OF COLORADO DENVER · PI HEASLEY, LYNN E · 2008 to 2012
$1.6M
NCI NIH HHS P30 CA046934NCI NIH HHS P50 CA058187NCI NIH HHS R01 CA127105
6 · The paper itself

Abstract

purposeTo test whether a microRNA (miRNA) panel may serve as an alternative biomarker of fibroblast growth factor receptor (FGFR) tyrosine kinase inhibitor sensitivity in lung cancer.

methodsHistologically diverse lung cancer cell lines were submitted to assays for ponatinib and AZD4547 sensitivity. miRNAs, FGFR1 messenger RNA, gene copy number, and protein expression were detected by real-time quantitative PCR, fluorescence in-situ hybridization, and immunoblotting in 34 lung cancer cell lines.

resultsAmong 34 cell lines, 14 exhibited ponatinib sensitivity and 20 exhibited AZD4547 sensitivity (drug concentration causing 50% inhibition values < 100 nmol/L). A total of 39 of the 377-miRNA set were initially identified from the 4 paired ponatinib-sensitive or -insensitive cell lines to have at least an 8-fold differential expression and then were detected in all the 34 cell lines. A predictive panel of 3 miRNAs (let-7c, miRNA155, and miRNA218) was developed that had an area under the curve (AUC) of 0.886 with a sensitivity of 71.4% and specificity of 77.3% to predict response to ponatinib. The miRNA panel performed similar to FGFR1 protein expression (AUC = 0.864) and messenger RNA expression (AUC = 0.939), and better than FGFR1 amplification (AUC = 0.696). Furthermore, we validated this panel using data for sensitivity to AZD4547 in the cell line cohort with an AUC of 0.931 and a sensitivity of 73.3% and specificity of 76.2%, respectively.

conclusionThe developed miRNA panel (let-7c, miRNA155, and miRNA218) may be useful in predicting response to FGFR tyrosine kinase inhibitors, either ponatinib or AZD4547 in lung cancer cell lines, and warrants further validation in the clinical setting.

Indexed as

Antineoplastic AgentsBenzamidesBiomarkers, TumorCarcinoma, Non-Small-Cell LungCell ProliferationHumansImidazolesLung NeoplasmsMicroRNAsPiperazinesPyrazolesPyridazinesReceptor, Fibroblast Growth Factor, Type 1Signal TransductionTumor Cells, CulturedAntineoplastic AgentsAZD4547BenzamidesBiomarkers, TumorFGFR1 protein, humanImidazolesMicroRNAsPiperazinesponatinibPyrazolesPyridazinesReceptor, Fibroblast Growth Factor, Type 1AZD4547biomarkerlung cancermiRNAponatinib

Identifiers

PMID30146263
PMCPMC6339511
OpenAlexW2810416587

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.